Gene Information

Name : lolD (VF_A0463)
Accession : YP_206421.1
Strain :
Genome accession: NC_006841
Putative virulence/resistance : Resistance
Product : outer membrane-specific lipoprotein transporter subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 532326 - 533042 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAATCCATTATTAGTTTGTCAGGGTATCCGTAAGGTTTACCAAGAAGGCGCGATGGAAACTGAAGTGCTTAAAGG
CGTGGACTTCCAAATTAATGGAAGTGAGTTAGTGGCGATTGTTGGCTCATCAGGTTCTGGTAAAAGTACACTGCTTCATA
TCTTAGGTGCGTTGGATGAACCAACGGCAGGTACGGTGCATTTCCAAGAGAATGAACTGACGAAGTTGAGTGCTAACAAA
CAAGCTAAAATTCGTAATCAGCATATTGGTTTTGTTTATCAATTTCACCATCTGCTCGCTGATTTTAGTGCACTAGAAAA
CGTAGCGATGCCATTACTTATTGGTGGAGTAAATAAGAAAGAAGCTGCGAAACGTGCCACTGAATTACTGGAAAAAGTAG
GGTTAGCGCACCGTATTGAACACCGCCCGTCGGAACTTTCAGGTGGTGAGCGTCAGCGTGTTGCGATTGCTAGAGCCTTG
GTGAATAAACCGGCTTTAGTATTAGCGGATGAACCAACTGGTAACCTAGATCATAAAACGGCATTAGATATTTATAATTT
AATGCGTGAGCTTAACCAAGAATCAGGTACGGCGTTTTTAGTTGTTACTCACGATAATGAATTAGCCGCAAAATTGGATA
AGCAACTAAGTATGCAAGATGGTCGCTTTATCACAGAAACGGTACGTTCAAGTTTAGCTCAAGAGATGGAGGCGTAA

Protein sequence : 
MSNPLLVCQGIRKVYQEGAMETEVLKGVDFQINGSELVAIVGSSGSGKSTLLHILGALDEPTAGTVHFQENELTKLSANK
QAKIRNQHIGFVYQFHHLLADFSALENVAMPLLIGGVNKKEAAKRATELLEKVGLAHRIEHRPSELSGGERQRVAIARAL
VNKPALVLADEPTGNLDHKTALDIYNLMRELNQESGTAFLVVTHDNELAAKLDKQLSMQDGRFITETVRSSLAQEMEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_206421.1 outer membrane-specific lipoprotein transporter subunit NC_012469.1.7686878. Protein 4e-44 48
lolD YP_206421.1 outer membrane-specific lipoprotein transporter subunit NC_008702.1.4606598. Protein 6e-40 47