Gene Information

Name : ybgA (SC159)
Accession : YP_209456.1
Strain :
Genome accession: NC_006856
Putative virulence/resistance : Virulence
Product : putative pathogenicity island protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 120981 - 121940 bp
Length : 960 bp
Strand : +
Note : IPR007553: Protein of unknown function DUF523

DNA sequence : 
ATGACAACAAAACCTGTGCTCGGTATTAGCGGATGTTTGACCGGGTCTGCCGTTCGCTTCGACGGCGGACACAAGCGTAT
GGGCTTTGTCATGGATGAACTGGCCCAGTGGGTGAGTTTCAGGCCCGTCTGCCCGGAAATGGCGATTGGCCTGCCGACGC
CACGCCCGGCCATACGCCTGACGCTGACGGACAGCGGCGAAACGCAGCTCCGCTTCAGCAAGCCGCCCCATGATGATATA
ACGCAGAAAATGGCCGACTTTACGGCGGACTATCTGCCAAAAATCGGCGATCTGTCGGGATTTATCGTCTGCGCGAAATC
GCCAAGCTGCGGCATGGAACGCGTGCGGCTATATGATGAAAACGGCAACCGGGGCCGCAAGGAGGGTGTCGGGCTGTTCA
CCGCCGCCCTGCTTGAAACCTACCCGTGGCTGCCCGTGGAGGAAGACGGTCGGCTGCACGCCCCGGTGCTGCGGGAAAAC
TTTATCGAGCGGGTATTTGCCCTGCACGAGCTGAACACGCTGCGCGCTAAAGGCCTGACGCGCCGCGCGCTGCTGGATTT
CCACAGCCGCTATAAATTGCAGCTTCTGGCGCACCATCAGGCGGGCTACCGCGAGATTGGCCCGTTCGTTGCGTCGCTGC
ATGAATGGGAAGATCTGGACGCGTTCTTCGTGGCGTACCGCGAAAAGCTGATGACCATCCTGAAAAAGCCCGCCTCGCGG
AAAAACCATACCAACGTGCTAATGCATATCCAGGGCTATTTCCGTAACCAGCTGAACAGCCGCCAGCGCGTCGAGCTGCG
CGATGTGATCCTGCACTATCGCGACGGGCTGCTACCCATCCTCGCGCCGTTGACGCTACTGAAACACTACATGGCCGAAT
ACCCTGACCGGTATCTGATGACGCAAAACTACTTTGATCCCTATCCTGATGATTTGGGTCTGCGTCTGGCAGTAACCTGA

Protein sequence : 
MTTKPVLGISGCLTGSAVRFDGGHKRMGFVMDELAQWVSFRPVCPEMAIGLPTPRPAIRLTLTDSGETQLRFSKPPHDDI
TQKMADFTADYLPKIGDLSGFIVCAKSPSCGMERVRLYDENGNRGRKEGVGLFTAALLETYPWLPVEEDGRLHAPVLREN
FIERVFALHELNTLRAKGLTRRALLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLDAFFVAYREKLMTILKKPASR
KNHTNVLMHIQGYFRNQLNSRQRVELRDVILHYRDGLLPILAPLTLLKHYMAEYPDRYLMTQNYFDPYPDDLGLRLAVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 4e-124 76
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 4e-124 76
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 3e-124 76
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 8e-124 76
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 4e-124 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybgA YP_209456.1 putative pathogenicity island protein VFG0490 Protein 2e-124 76