Gene Information

Name : lolD (SC1168)
Accession : YP_216155.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Resistance
Product : lipoprotein transporter ATP-binding subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1285234 - 1285935 bp
Length : 702 bp
Strand : +
Note : outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone

DNA sequence :
ATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCACCGTACAAACCGACGTGTTGCACGA
TATCAGCTTCAGTATCGGCGAAGGCGAAATGATGGCGATCGTCGGCAGTTCCGGTTCGGGTAAAAGTACGTTGCTGCATC
TGTTAGGCGGGCTGGATACGCCTACCTCTGGCGATGTGATTTTTAGCGGCCAGCCGATGAGCAAACTCTCTTCTGCGGCA
AAAGCGGAATTACGTAACCAGAAACTGGGGTTTATCTATCAGTTTCATCATCTCCTGCCGGATTTTACGGCGCTGGAAAA
CGTGGCGATGCCATTATTGATTGGCAAAAAGAAACCGGCGGAGATTGATGCTCGGGCGCGAGAAATGCTGCACGCCGTAG
GGCTGGAGCATCGCGCAACCCATCGACCTTCGGAACTTTCCGGCGGTGAGCGCCAGCGTGTCGCGATAGCGCGCGCGTTG
GTGAATAATCCGCGTCTGGTACTGGCGGATGAGCCGACCGGTAATCTGGATGCGCGTAATGCCGACAGTATTTTTGAGCT
TTTGGGCGAGTTAAATCGTCTGCAGGGAACCGCGTTTCTGGTGGTGACTCACGATTTGCAACTGGCGAAACGTATGAGCC
GCCAGCTTGAGATGCGCGATGGCCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAA

Protein sequence :
MNKILLQCDNLCKRYQEGTVQTDVLHDISFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFSGQPMSKLSSAA
KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIDARAREMLHAVGLEHRATHRPSELSGGERQRVAIARAL
VNNPRLVLADEPTGNLDARNADSIFELLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_216155.1 lipoprotein transporter ATP-binding subunit NC_008702.1.4606598. Protein 8e-37 50
lolD YP_216155.1 lipoprotein transporter ATP-binding subunit NC_012469.1.7686878. Protein 2e-40 44
lolD YP_216155.1 lipoprotein transporter ATP-binding subunit CP001581.1.gene798.p Protein 8e-36 41