|
Name : cobT (SC2024) Accession : YP_217011.1 Strain : Salmonella enterica SC-B67 Genome accession: NC_006905 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG2038 EC number : 2.4.2.21 Position : 2119042 - 2120142 bp Length : 1101 bp Strand : - Note : catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole DNA sequence : ATGAGCCGATTATTACGGACGAGACATCTTATGCAGACACTACACGCTTTACTCCGTGACATTCCTGCGCCGGACGCCGA GGCGATGGCGCGTGCGCAGCAACATATTGACGGCCTGCTCAAACCGCCGGGCAGCCTGGGCAGACTGGAAACCTTAGCCG TTCAGCTCGCAGGAATGCCGGGTCTTAACGGTACGCCGCAGGTAGGTGAAAAGGCGGTGCTGGTGATGTGCGCCGACCAT GGCGTCTGGGATGAAGGCGTAGCGGTTTCGCCCAAAATCGTGACGGCGATTCAGGCGGCGAATATGACGCAGGGAACAAC CGGCGTATGCGTGCTTGCCGCTCAGGCCGGTGCGAAGGTGCATGTCATTGATGTCGGTATTGATGCCGAACCTATTCCTG GCGTAGTTAATATGCGCGTCGCGCGCGGCTGCGGAAATATTGCCGTTGGCCCGGCGATGAGTCGCTCGCAAGCTGAGGCG CTTTTGCTGGAGGTTTCCCGCTACACCTGCGACCTGGCGCAACGCGGCGTGACCTTATTTGGCGTAGGGGAGCTGGGAAT GGCGAACACTACGCCAGCCGCCGCGATGGTCAGCGTTTTTACAGGAAGTGATGCAAAAGAGGTGGTGGGGATTGGCGCGA ATCTTCCGCCTTCCCGCATCGATAATAAAGTGGACGTCGTGCGGCGGGCGATTGCGATTAATCAGCCCAATCCGCGCGAT GGCATTGATGTGTTGTCGAAGGTGGGTGGTTTTGATCTGGTCGGGATGACCGGCGTGATGCTTGGCGCGGCAAGGTGTGG CTTACCCGTATTGCTGGATGGTTTTCTTTCCTACTCGGCAGCGCTGGCGGCCTGTCAGATTGCGCCTGCGGTGAGACCTT ATCTGATCCCGTCGCACTTTTCGGCGGAAAAGGGCGCTCGCATCGCGCTCGCGCATTTGTCTATGGAACCCTATTTGCAT ATGGCGATGCGGTTAGGTGAAGGAAGCGGCGCGGCGCTGGCGATGCCGATCGTGGAAGCCGCGTGCGCCATGTTCCACAA TATGGGGGAGTTAGCGGCCAGTAATATTGTCCTGCCGGAGGGGAACGCAAACGCAACATAA Protein sequence : MSRLLRTRHLMQTLHALLRDIPAPDAEAMARAQQHIDGLLKPPGSLGRLETLAVQLAGMPGLNGTPQVGEKAVLVMCADH GVWDEGVAVSPKIVTAIQAANMTQGTTGVCVLAAQAGAKVHVIDVGIDAEPIPGVVNMRVARGCGNIAVGPAMSRSQAEA LLLEVSRYTCDLAQRGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVRRAIAINQPNPRD GIDVLSKVGGFDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAVRPYLIPSHFSAEKGARIALAHLSMEPYLH MAMRLGEGSGAALAMPIVEAACAMFHNMGELAASNIVLPEGNANAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 4e-135 | 78 |
