Gene Information

Name : pduA (SC2046)
Accession : YP_217033.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Virulence
Product : propanediol utilization polyhedral bodies protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2138585 - 2138869 bp
Length : 285 bp
Strand : +
Note : IPR000249: Bacterial microcompartments protein

DNA sequence : 
ATGCAACAAGAAGCACTAGGAATGGTAGAAACCAAAGGCTTAACCGCAGCCATAGAGGCCGCTGATGCAATGGTTAAGTC
AGCCAATGTGATGTTAGTGGGCTATGAAAAGATTGGCTCCGGGCTGGTAACCGTCATCGTGCGCGGCGATGTTGGCGCGG
TCAAAGCGGCCACCGATGCAGGTGCCGCAGCCGCACGCAACGTGGGTGAAGTGAAAGCCGTACACGTCATCCCACGCCCT
CACACCGATGTAGAAAAAATCTTACCGAAGGGAATTAGCCAATGA

Protein sequence : 
MQQEALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRP
HTDVEKILPKGISQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-13 68
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-12 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pduA YP_217033.1 propanediol utilization polyhedral bodies protein VFG1596 Protein 1e-13 68
pduA YP_217033.1 propanediol utilization polyhedral bodies protein VFG1598 Protein 9e-13 65
pduA YP_217033.1 propanediol utilization polyhedral bodies protein VFG1597 Protein 1e-12 63