Name : shiA (SC0212) Accession : YP_215199.1 Strain : Salmonella enterica SC-B67 Genome accession: NC_006905 Putative virulence/resistance : Unknown Product : inner membrane protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 244064 - 245365 bp Length : 1302 bp Strand : + Note : IPR007114: Major facilitator superfamily DNA sequence : ATGTCCGGAACGTATAATGCCACTATTCGCCGGGTGGTGATTTCCGCCTGGATAGGAAACTCCATTGAATATTATGATTT TCTATTATATGGCCTGGCAAGCGCGCTGGTATTTGGCCCGCTTTTTTTCCCTGGCGCCAGCCCATTGACTGCAACGTTAT CTTCTTTTGCCAGTTTCGGCGTGGGATTTATTTCCCGACCGCTGGGCGCGCTATTTTTTGGCAACAGGGGGGATACGCTT GGGCGTAAAAACACGTTATTAATCACGTTAGGCGGGATGGGCGCGGTCACGTTTCTCATCGGTTGCCTGCCTTCTTACGC CAGTATCGGCGCGCTGGCGCCTGCTTTACTGGTTATTCTGCGTTTTCTACAGGGATTTATGGTTGGAGGCGAATGGGGAG GCGCCATGTTGATGGTCGTGGAATATGCTGCTGGAAAGCACCGGGGGCGGTTAAGCGCGCTATCGCAAACAGGAGGACTC ACGGGACAATTATTGGCGACAGGCGTATTTATAGTCGTGACCCAATTACCGAAGGAGGCGTTGTTATCGTGGGGATGGCG TATTCCTTTTCTGCTCAGTGCGCTTTTGGTGTTGCCTGGATTATATATGCGTCATCGTCTGGATGAGACGCCTGTCTTCC GTGCGTTTAAAAAGCAGCAGGCCATTAATCATAGGCAGCAAAGAGAAGAAAGGCCGGTGGTCAAAGTAGTACGAGAACAA TGGCGCAGCATTTTGCTGATTATAATTCTGCGTTTTGCGGAAAGCGTTCCCTTTTTTCTTGCCACCGTCTTCGCGGTTTC CTGGGCGACGACGCAGCTTGGGATTGCCAGCCTGACTATTCTGTACATTGTAATGTTCACCTGTCTGCTGGCGTATCCCA TGCACGTGCTATTTGGCATCATGTCGGATCGGCGTGGCTGCCGTCAGGTGTATATTTTCGGCGCGCTTTTTGTCGCGGCA ATGGCTTTTCCCTTTTTCTGGCTGCTGGAAAGCCGTTCGCTCATACTGATGACAATGGGCTACGTTCTGCTTATTAACAT TGGTCATAATTCACTGAATGCCGTGCAACCTTCTTTTTTCGCCGGACTGTTTCATCCGCCTGTACGCTACAGCGGTTCAT CAATTGGCGCTCAGTTGGGGGCGGTTGTGGCAGGGGGATTCACGCCGTTTATCGCTAAAGCGTTAAGCGCAGTCTATGAT AACAGTTGGACTTTGGTTGCCGGTTATGTCGTTTTGACTGCGCTGGCTTCGGCGTTTGCGGCAAAGATTGCGCCGGAAAC CGTGTTACCGCATTCGCCGTAA Protein sequence : MSGTYNATIRRVVISAWIGNSIEYYDFLLYGLASALVFGPLFFPGASPLTATLSSFASFGVGFISRPLGALFFGNRGDTL GRKNTLLITLGGMGAVTFLIGCLPSYASIGALAPALLVILRFLQGFMVGGEWGGAMLMVVEYAAGKHRGRLSALSQTGGL TGQLLATGVFIVVTQLPKEALLSWGWRIPFLLSALLVLPGLYMRHRLDETPVFRAFKKQQAINHRQQREERPVVKVVREQ WRSILLIIILRFAESVPFFLATVFAVSWATTQLGIASLTILYIVMFTCLLAYPMHVLFGIMSDRRGCRQVYIFGALFVAA MAFPFFWLLESRSLILMTMGYVLLINIGHNSLNAVQPSFFAGLFHPPVRYSGSSIGAQLGAVVAGGFTPFIAKALSAVYD NSWTLVAGYVVLTALASAFAAKIAPETVLPHSP |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-58 | 41 |