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Name : Psyr_1186 (Psyr_1186) Accession : YP_234278.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : type III effector HopM1 Function : - COG functional category : - COG ID : - EC number : - Position : 1340413 - 1342569 bp Length : 2157 bp Strand : + Note : - DNA sequence : ATGATTGGCACACGAGTCGGCGGATCAGGCAGTACCGAAATCGTTCAGGCGAACCAGCCGCAGCCGTCTGCCGCTGTCGC CCAGGCTCATCCACACGCGGTAAGCCCGAGCAGCAACCCGCCGCTGACCGCCAGCCAGTCGGCCGCGCAAGCGCCGGAAA GCTCGGCGGCCGGTGCCGCTCGCCTGCCAGTCGCGCCGCGACATCTGCCGACATTGGAGAAGTTTCGTGCCGAACAGCCC ACCGTACAAGGCACTTCCACGCCGACTATCAGCGCTAACGCGGCCCTGCTGATCGGCAGTCTGTTGCAGTCTGAAAAACT GCCCTTCGAGGTCATGGCCGCCCGTTTGTCGCCTGAGCGTTATGCGTTGCAGCAGTTTCACGGCTCCGATTTACAGCAAA TGCTCGGACGATTCGCTGAGCCAGGGCATCTGCCAGGCAAGGCCGAGACCGAACAACTGATCAAGGGCTTTGCCCGGTCG CTCGCAGACCAGCTGGAGCACTTCCAGCTCATGCATGACGCGACGGCTGAGGCATTCGGCCCCGGAGGGCTGCGCGACCG CAACACACTGGCGGTCAGTCAAGCGGCGCTTGGCGAATACGCCGGTCGGGCGAGTAAATCCATCGAAGCGGGGCTGAACC ACAGTCTCGCGGTGCTGGACGAGCGCATCGCCGCGCTGGACAGCCAGTTGGAGGGCGCCACTGAGGACAGCAGACCGGTT TTGCTGATGGACAGGCAGGCGCTGGAAACGGCCAGGGCGATGCTGAGCGACCTGCACGTCGACTTCTGCAAATCGCCTGA AGCCAAGCGGTTGAGTGCCGTTGCCGCTCACACGCAAATGGATGCTCTGATCGACAAGCTGAACGTTGATCGCAGCTCGG TCGGCGGCTGGAAGGGGATCGGTCCGATCGTCGCGGCAGCGGTGCCGCAGTTTATGGTGTCCATGCTCCACCTGGGGTAT ATCCGCACGGCCACCAGTGACGCGATGAAAGATGCCGTTCCCGAAAAAAGCGCCGACGCCAGCATGAAGAGGGCCCTGGC CGTAGGACTGACTGCCGGGGTGGCTCACGAGGGCGTTACCAACCTCTTGAAGCCGATGGTGCAGGCCGGGTTTCAGAAAG CCGGCCTCAACGAGCGGCTGAATATGGTGCCGCTCAAGGGTATTGATACCGACTCGGTGATTCCCGACCCTTTCGAGTTG AAGAACGACAACGGCGCACTGGTCAGAAAAACGCCTGAGGAAGCCGCTGAGGACAAAGCCTTCGTCGCAAGCGAGCGAGC GGTTTTGAATCAGAAAAAGGTTCAGGTTTCGTCTACCCATCCACTGGGTGAGATGATCCCCTACGGCGCCTTTGGTGGCG GGCAGGCGGTACGCCAGATGCTCAATGATTTCAATCTGCTCAATGGCCAGACCCTGTCGGCCAGAGCGGTGACCTCCGGG ATCGCCGGGGCCATATCAGCCACCACCCAGACCATTGCACAGCTGAACTCGACCTATGTCGATCCGCGCGGGCGCAAGAT CCCGGTCTTCACCCCGGACCGCGCCAATGCCGACCTGGGCAAGGACCTGGCCAAAGGCCTGGACCTTCGCGAACCGGCGG TACGCACCGCGTTCTACAGCAAGGCTGTTTCAGGTGTGCAGAGCGCAGCGCTGAACGGCGCGCTACCATCGGTTGCCGTC CAGCCCCAAGGTGCATCCGGCACGCTCAGCGCGGGGAATATCATGCGCAACATGGCGCTGGCGGCAACCGGTTCGGTGTC TTACCTGTCGACCCTGTATGCCAACCAGTCGGTCACGGCCGAGGCCAAGGCCCTGAAAGAGGCGGGCATGGGCGGCGCAA CGCCAATGGTAGCTCGCACTGAAACCGCCCTGAGCAACATCCGCCATCCGGACAGAGCTTCACTGCCGCATACGTTCCAG CCGGATACCCTGGGTGGCGTCCCCAGGGCCGTGGAAAACGCCTATCACATGGCCCGGGGCGCGCTGCAATTACCGACCCA GGTGGTGGTCGATACGGTGCGTGTCGTGGAAGACGGCGTAGCAAGCGGGGTGTCCTCGTTGCGCGATGCACATAAACCAG CGGAAACATCATCGCCAACAGCTGATGACGCCGCTGCTGTCGAACTGACGGCGATGGAGGAGGGCCGCCGACGCTGA Protein sequence : MIGTRVGGSGSTEIVQANQPQPSAAVAQAHPHAVSPSSNPPLTASQSAAQAPESSAAGAARLPVAPRHLPTLEKFRAEQP TVQGTSTPTISANAALLIGSLLQSEKLPFEVMAARLSPERYALQQFHGSDLQQMLGRFAEPGHLPGKAETEQLIKGFARS LADQLEHFQLMHDATAEAFGPGGLRDRNTLAVSQAALGEYAGRASKSIEAGLNHSLAVLDERIAALDSQLEGATEDSRPV LLMDRQALETARAMLSDLHVDFCKSPEAKRLSAVAAHTQMDALIDKLNVDRSSVGGWKGIGPIVAAAVPQFMVSMLHLGY IRTATSDAMKDAVPEKSADASMKRALAVGLTAGVAHEGVTNLLKPMVQAGFQKAGLNERLNMVPLKGIDTDSVIPDPFEL KNDNGALVRKTPEEAAEDKAFVASERAVLNQKKVQVSSTHPLGEMIPYGAFGGGQAVRQMLNDFNLLNGQTLSARAVTSG IAGAISATTQTIAQLNSTYVDPRGRKIPVFTPDRANADLGKDLAKGLDLREPAVRTAFYSKAVSGVQSAALNGALPSVAV QPQGASGTLSAGNIMRNMALAATGSVSYLSTLYANQSVTAEAKALKEAGMGGATPMVARTETALSNIRHPDRASLPHTFQ PDTLGGVPRAVENAYHMARGALQLPTQVVVDTVRVVEDGVASGVSSLRDAHKPAETSSPTADDAAAVELTAMEEGRRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hopM1 | NP_791202.1 | type III effector HopM1 | Virulence | Hrp PAI | Protein | 0.0 | 65 |
| unnamed | AAF71501.1 | unknown | Not tested | Hrp PAI | Protein | 0.0 | 65 |
| unnamed | AAT96166.1 | HopPtoM-like protein | Virulence | T-PAI | Protein | 2e-173 | 55 |
| unnamed | AAT96220.1 | HopPtoM-like protein | Virulence | T-PAI | Protein | 1e-173 | 55 |
