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Name : Psyr_1189 (Psyr_1189) Accession : YP_234281.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0741 EC number : - Position : 1348699 - 1350222 bp Length : 1524 bp Strand : + Note : - DNA sequence : ATGGCCGCCGTTGCCCTCCACGTTTCGTCTCCTCGTTTGCTGGCTCGTTCGGTACAGATCGCCGTTCTGGCCCTGGGGGC GCTGTGTGTGGGCTGTCAGTCAGTCGATGACTCACCGTCGCGCCTGGACCGCTTGCCGCGACTGGTCGCCGGGCTGGGGT ATCGCTCGGCCGACGCGCAGGCCGACCCCCTGGCTGCAACGACTGTTGCCGATTTGCCCGTCTACAACGGCGAGGACGTT TGGCAACGGGTGGCGCAGCGATGCCGGCTGGTGGACGGGCAGGGCGTCAATGAACGTATCGCTCGCCAGCGTGACTGGTT GCTGAACAATCGCGGTTTTCTGACCGGGGCCAGCAAGCGCGCCACGCCTTACCTGCATTTCATTGTCGAACGTCTCGATG AACGCAACATGCCACTGGAACTGGCGCTGCTGCCCATGATCGAGAGCTCCTACAATCCCTTGGCCAACTCCCCGGCGGCG GCAGCGGGCCTCTGGCAGTTCATCCCGTCTACCGGTCGCCAGTTCAACTTGAACCAGAGCGCTACCTACGACGCCCGCCG CGATGTTGTCGCGTCAAGCAAGGCGGCGATGGACTATCTGACTCGCCTGCATGATCAGTTCAATAACGACTGGCTGTTGG CACTGGCGGCCTATAACGCAGGCGAGGGCACGGTTGCACGAGCGATCGACGCCAACCGTCGACGTGGCATGCCTGTCGAC TACTGGCATTTGAATTTACCCCGGGAAACCCAGGACTACGTTCCGCGCCTGCTGGCACTTTCGCTGGTGGTGCGCAATCC AGGCGCCTACGGCGTGCAACTGACGCCGGTCGCCAACATGCCGTATTTCGATGTGGTTGAGCTCAACCACACGGTAGACC TGACTCAGCTCGCCGCCACCACCGGGGTAGACGAGGCACAGTTGTTGCGCCTCAACCCGGCATTCCTGCGAAAAAAGACC CCGGATGGCCCGGGACGTTTGCTGATTCCCAAGACCCACACGCAGGTGTTGACGGCAGGTATCGAGCGGATCACCGGAGA GTCGCCGACAACCGCTGTCATCCCGGCAAGTCCCGGAAAGCGTGTGATCGAGCGCGAGCCATCGTCGCAAGTGGCCGAGC GCGCTCCGACGCCTGAGCCGTTGCAGGCAGCAGGGCGCGAGCAGACGGCAGGCCTGATGCAGGTGCTTGAGCGCGAGCCA GCACCGGAATCGGTGCAGCCGGTCAGGCGTGAACCGCAACCGAAAGTCGTCCAGGTTGCCAGGCAGGAGCCCTTGCCCGG CCCCGCGCAACCCGTTCAGGCTGCCGAACAGGTAACTGTGTCCGACCCCATCCAGCCTGCGCGTCAGGCGTCGTCGCAGG CGACAAACGAGCGTTCGCTACTGGACCGCCGGATACAAAAGAGGCTGTACATTGATGACCGTTCGTCGCCACGCAAGCGC GACGAGATCGCGTATCGCGATGAGCCGCGTGAGCTGCCGAACGGTCCTCGTGTCGTGGTGTACGCCAGCGATCCACGCCA ATAA Protein sequence : MAAVALHVSSPRLLARSVQIAVLALGALCVGCQSVDDSPSRLDRLPRLVAGLGYRSADAQADPLAATTVADLPVYNGEDV WQRVAQRCRLVDGQGVNERIARQRDWLLNNRGFLTGASKRATPYLHFIVERLDERNMPLELALLPMIESSYNPLANSPAA AAGLWQFIPSTGRQFNLNQSATYDARRDVVASSKAAMDYLTRLHDQFNNDWLLALAAYNAGEGTVARAIDANRRRGMPVD YWHLNLPRETQDYVPRLLALSLVVRNPGAYGVQLTPVANMPYFDVVELNHTVDLTQLAATTGVDEAQLLRLNPAFLRKKT PDGPGRLLIPKTHTQVLTAGIERITGESPTTAVIPASPGKRVIEREPSSQVAERAPTPEPLQAAGREQTAGLMQVLEREP APESVQPVRREPQPKVVQVARQEPLPGPAQPVQAAEQVTVSDPIQPARQASSQATNERSLLDRRIQKRLYIDDRSSPRKR DEIAYRDEPRELPNGPRVVVYASDPRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| celORF1 | AAP31244.1 | conserved effector locus ORF1 | Not tested | Hrp PAI | Protein | 0.0 | 95 |
| unnamed | AAF71498.1 | unknown | Not tested | Hrp PAI | Protein | 2e-162 | 71 |
| hrpH | NP_791205.1 | membrane-bound lytic murein transglycosylase D | Virulence | Hrp PAI | Protein | 2e-162 | 71 |
| unnamed | AAT96163.1 | membrane-bound lytic murein transglycosylase-like protein | Not tested | T-PAI | Protein | 1e-148 | 64 |
| unnamed | AAT96217.1 | membrane-bound lytic murein transglycosylase-like protein | Not tested | T-PAI | Protein | 1e-148 | 64 |
