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Name : HrcC (Psyr_1200) Accession : YP_234292.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : outer-membrane type III secretion protein HrcC Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 1357786 - 1359888 bp Length : 2103 bp Strand : + Note : - DNA sequence : ATGCGCAAGGCCTTGATGTGGTTGCCTTTATTGTTGATCGGGCTGTCCCCCGCCACGTGGGCGGTGACCCCCGAAGCCTG GAAACATACGGCTTACGCCTACGATGCCCGGCAGACCGAGCTGGCGACAGCGCTGGCCGACTTCGCCAAGGAATTCGGCA TGGCGCTGGATATGCCGCCCATTCCCGGGGTCCTTGATGACCGGATACGCGCTCAGAGCCCGGAAGAGTTTCTCGACCGC CTGGGCCAGGAATATCACTTCCAGTGGTTTGTGTATAACGACACGTTGTACGTCAGCCCCTCCAGCGAGCACACCTCGGC ACGCATCGAAGTGTCATCCGACGCGGTAGATGACCTGCAGACTGCCTTGACCGATGTAGGGCTGCTGGACAAGCGCTTCG GGTGGGGGGTACTGCCGAACGAGGGCGTGGTTCTGGTTCGTGGCCCGGCAAAATATGTGGAACTGGTGCGCGATTACAGC AAGAAAGTCGAAGCGCCGGAAAAGGGCGACAAGCAGGACATCATCGTATTCCCGCTCAAGTACGCCAGTGCCGCGGACCG CACCATTCGCTATCGCGATCAACAACTGGTGGTCGCCGGGGTGGCCAGTATTCTCCAGGATTTGCTGGATACCCGTTCTC GTGGCGGGTCGATCAATGGTATGGATCTGCTGGGGCGAGGCGGTCGCGGTAACGGCCTGGCGGGCGGTGGCAGCCCGGAC GCTCCGAGTCTGCCGATGAGCTCCAGCGGCCTCGATACCAATGCGTTGGAGCAGGGCCTCGATCAGGTGCTGCACTATGG CGGCGGCGGCAAAAGCGCTGGAAAAAGCCGCTCTGGCGGTCGGGCCAACATCCGTGTAACGGCCGATGTCCGTAACAACG CCGTGCTGATCTACGACTTGCCCTCGCGCAAGGCCATGTACGAAAAGCTCATCAAAGAGCTGGATGTTTCGCGCAACCTG ATCGAAATCGACGCCGTGATCCTCGACATCGATCGCAACGAGCTGGCAGAACTGTCCAGCCGCTGGAACTTCAATGCCGG GAGTGTCAACGGGGGCGCCAACATGTTCGACGCTGGCACCAGCTCCACCCTGTTCATTCAGAACGCCGGCAAGTTCGCTG CCGAACTGCATGCGCTGGAAGGTAACGGTTCAGCCTCGGTGATCGGCAACCCGTCCATTCTTACCCTTGAAAACCAGCCG GCCGTGATCGACTTCAGTCGCACCGAATACCTCACCGCGACGTCGGAACGCGTGGCCAATATCGAGCCCATCACCGCAGG CACCAGTTTGCAGGTGACTCCGCGCTCGCTGGATCACGATGGCAAGCCTCAGGTGCAACTGATCGTCGATATCGAGGATG GTCAGATCGACATCTCCGACATCAATGACACGCAGCCAAGTGTGCGCAAAGGCAATGTCAGTACCCAGGCCGTCATAGCC GAACACGGTTCACTGGTCATCGGCGGTTTCCATGGCCTTGAAGCCAACGACAAGGTCCACAAGGTTCCGTTGCTGGGCGA CATCCCCTACATCGGCAAACTGCTGTTCCAGTCCCGCAGCCGTGAACTGAGCCAGCGCGAGCGCCTGTTCATTCTGACGC CAAGACTGATTGGCGACCAGGTCAACCCGGCTCGCTATGTGCAGAACGGCAACCCTCACGATGTCGATGATCAGATGAAA AGGATCAAGGAACGGCGTGACGGCGGTGAGCTGCCTACCCGCGGCGACATTCAGAAAGTCTTCACGCAGATGGTCGATGG CGCTGCGCCAGAGGGCATGCATGATGGCGAAACACTGCCCTTTGAAACCGACAGCCTGTGTGACCCGGGTCAGGGCCTGA GCCTCGATGGCCAGCGCTCGCAATGGTATGCACGCAAGGACTGGGGTGTGGCCGTCGTGGTAGCGCGTAACAATACCGAC AAACCGGTGCGCATCGACGAGAGTCGTTGCGGTGGTCGCTGGGTCATCGGCGTCGCCGCCTGGCCCCACGCATGGCTGCA ACCGGGCGAGGAGAGCGAAGTGTATATCGCGGTACGTCAGCCACAGATATCGAAAATGGCCAAAGAGAGCCGGCCATCAC TGCTCCGGGGGGCAAAGCCATGA Protein sequence : MRKALMWLPLLLIGLSPATWAVTPEAWKHTAYAYDARQTELATALADFAKEFGMALDMPPIPGVLDDRIRAQSPEEFLDR LGQEYHFQWFVYNDTLYVSPSSEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGVLPNEGVVLVRGPAKYVELVRDYS KKVEAPEKGDKQDIIVFPLKYASAADRTIRYRDQQLVVAGVASILQDLLDTRSRGGSINGMDLLGRGGRGNGLAGGGSPD APSLPMSSSGLDTNALEQGLDQVLHYGGGGKSAGKSRSGGRANIRVTADVRNNAVLIYDLPSRKAMYEKLIKELDVSRNL IEIDAVILDIDRNELAELSSRWNFNAGSVNGGANMFDAGTSSTLFIQNAGKFAAELHALEGNGSASVIGNPSILTLENQP AVIDFSRTEYLTATSERVANIEPITAGTSLQVTPRSLDHDGKPQVQLIVDIEDGQIDISDINDTQPSVRKGNVSTQAVIA EHGSLVIGGFHGLEANDKVHKVPLLGDIPYIGKLLFQSRSRELSQRERLFILTPRLIGDQVNPARYVQNGNPHDVDDQMK RIKERRDGGELPTRGDIQKVFTQMVDGAAPEGMHDGETLPFETDSLCDPGQGLSLDGQRSQWYARKDWGVAVVVARNNTD KPVRIDESRCGGRWVIGVAAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLRGAKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcC | AAB05085.2 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrcC | NP_791216.2 | outer-membrane type III secretion protein HrcC | Virulence | Hrp PAI | Protein | 0.0 | 85 |
| hrcC | AAT96206.1 | HrcC | Virulence | T-PAI | Protein | 0.0 | 83 |
| hrcC | AAT96152.1 | HrcC | Virulence | T-PAI | Protein | 0.0 | 83 |
| hrcC | AAC34756.1 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 81 |
| hrcC | AAT96354.1 | HrcC | Virulence | S-PAI | Protein | 9e-138 | 47 |
| hrcC | AAT96274.1 | HrcC | Virulence | S-PAI | Protein | 9e-136 | 47 |
| hrcC | AAT96315.1 | HrcC | Virulence | S-PAI | Protein | 3e-136 | 47 |
| hrcC | ABA47303.1 | HrcC | Virulence | S-PAI | Protein | 1e-140 | 46 |
| hrcC | AAB49179.1 | HrcC | Virulence | Hrp PAI | Protein | 2e-132 | 44 |
