Gene Information

Name : AvrB3 (Psyr_1219)
Accession : YP_234311.2
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : type III effector protein AvrB3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1377971 - 1378942 bp
Length : 972 bp
Strand : +
Note : -

DNA sequence :
ATGGGTTGCGTATCGTCAAAAGCATCTGTCATTTCTTCGGACAGCTTTCGCGCATCATATACAAACTCTCCAGAGGCATC
CTCAGTCCATCAACGAGCCAGGACGCCAAGGTGCGGTGAGCTTCAGGGGCCCCAAGTGAGCAGATTGATGCCTTACCAGC
AGGCGTTAGTAGGTGTGGCCCGATGGCCTAATCCGCATTTTAACAGGGACGATGCGCCCCACCAGATGGAGTATGGAGAA
TCGTTCTACCATAAAAGCCGAGAGCTTGGTGCGTCGGTCGCCAATGGAGAGATAGAAACGTTTCAGGAGCTCTGGAGTGA
AGCTCGTGATTGGAGAGCTTCCAGAGCAGGCCAAGATGCTCGGCTTTTTAGTTCATCGCGTGATCCCAACTCTTCACGGG
CGTTTGTTACGCCTATAACTGGACCATACGAATTTTTAAAAGATAGATTCGCAAACCGTAAAGATGGAGAAAAGCATAAG
ATGCTGGATTTTCTCCCACACAGCAATACGTTTAGGTTTCATGGGAAAATTGACGGTGAGCGACTTCCTCTCACCTGGAT
CTCGATAAGTTCTGATCGTCGTGCCGACAGAACAAAGGATCCTTACCAAAGGTTGCGCGACCAAGGCATGAACGATGTGG
GTGAGCCTAATGTGATGTTGCACACCCAAGCCGAGTATGTGCCCAAAATTATGCAACATGTGGAGCATCTTTATAAGGCC
GCTACGGATGCTGCATTGTCCGATGCCAATGCGCTGAAAAAACTCGCAGAGATACATTGGTGGACGGTACAAGCTGTTCC
CGACTTTCGTGGAAGTGCAGCTAAGGCTGAGCTCTGCGTGCGCTCCATTGCCCAGGCAAGGGGCATGGACCTGCCGCCGA
TGAGACTCGGCATCGTGCCGGATCTGGAAGCGCTTACGATGCCTTTGAAAGACTTTGTGAAAAGTTACGAAGGGTTCTTC
GAACATAACTGA

Protein sequence :
MGCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQGPQVSRLMPYQQALVGVARWPNPHFNRDDAPHQMEYGE
SFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQDARLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHK
MLDFLPHSNTFRFHGKIDGERLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHLYKA
ATDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLGIVPDLEALTMPLKDFVKSYEGFF
EHN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71496.1 unknown Not tested Hrp PAI Protein 1e-141 99
unnamed AAN85189.1 unknown Not tested Hrp PAI Protein 2e-109 75