Gene Information

Name : Psyr_1224 (Psyr_1224)
Accession : YP_234313.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : type III effector HopZ3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1382497 - 1383732 bp
Length : 1236 bp
Strand : -
Note : -

DNA sequence :
ATGAATATCTCAGGTCCGAACAGACGTCAGGGGACTCAGGCAGAGAACACTGAAAGCGCTTCGTCATCATCGGTAACTAA
CCCACCGCTACAGCGTGGCGAGGGCAGACGTCTGCGACGTCAGGATGCGCTGCCAACGGATATCAGATACAACGCCAACC
AGACAGCGACATCACCGCAAAACGCGCGCGCGGCAGGAAGATATGAATCAGGGGCCAGCTCATCCGGCGCGAATGATACT
CCGCAGGCTGAAGGTTCAATGCCTTCGTCGTCCGCCCTTTTACAATTTCGCCTCGCCGGCGGGCGGAACCATTCTGAGCT
GGAAAATTTTCATACTATGATGCTGAACTCACCGAAAGCATCACGGGGAGATGCTATACCTGAGAAGCCCGAAGCAATAC
CTAAGCGCCTACTGGAGAAGATGGAACCGATTAACCTGGCCCAGTTAGCTTTGCGTGATAAGGATCTGCATGAATATGCC
GTAATGGTCTGTAACCAAGTGAAAAAGGGTGAAGGTCCGAACTCCAATATTACGCAAGGAGATATCAAGTTACTGCCGCT
GTTCGCCAAAGCGGAAAATACAAGAAATCCCGGCTTGAATCTGCATACATTCAAAAGTCATAAAGACTGTTACCAGGCGA
TAAAAGAGCAAAACAGGGATATTCAAAAAAACAAGCAATCGCTGAGTATGCGGGTTGTTTACCCCCCATTCAAAAAGATG
CCAGACCACCATATAGCCTTGGATATCCAACTGAGATACGGCCATCGACCGTCGATTGTCGGCTTTGAGTCTGCCCCTGG
GAACATTATAGATGCTGCAGAAAGGGAAATACTTTCAGCATTAGGCAACGTCAAAATCAAAATGGTAGGAAATTTTCTTC
AATACTCGAAAACTGACTGCACCATGTTTGCGCTTAATAACGCCCTGAAAGCTTTTAAACATCACGAAGAATATACCGCC
CGTCTGCACAATGGAGAAAAGCAGGTGCCTATCCCGGCGACCTTCTTGAAACATGCTCAGTCAAAAAGCTTAGTGGAGAA
TCACCCGGAAAAAGATACCACCGTCACTAAAGACCAGGGCGGTCTGCATATGGAAACGCTATTACACAGAAACCGTGCCT
ACCGGGCGCAACGATCTGCCGGTCAGCACGTTACCTCTATTGAAGGTTTCAGAATGCAGGAAATAAAGAGAGCAGGTGAC
TTCCTTGCCGCAAACAGGGTCCGGGCCAAGCCTTGA

Protein sequence :
MNISGPNRRQGTQAENTESASSSSVTNPPLQRGEGRRLRRQDALPTDIRYNANQTATSPQNARAAGRYESGASSSGANDT
PQAEGSMPSSSALLQFRLAGGRNHSELENFHTMMLNSPKASRGDAIPEKPEAIPKRLLEKMEPINLAQLALRDKDLHEYA
VMVCNQVKKGEGPNSNITQGDIKLLPLFAKAENTRNPGLNLHTFKSHKDCYQAIKEQNRDIQKNKQSLSMRVVYPPFKKM
PDHHIALDIQLRYGHRPSIVGFESAPGNIIDAAEREILSALGNVKIKMVGNFLQYSKTDCTMFALNNALKAFKHHEEYTA
RLHNGEKQVPIPATFLKHAQSKSLVENHPEKDTTVTKDQGGLHMETLLHRNRAYRAQRSAGQHVTSIEGFRMQEIKRAGD
FLAANRVRAKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71492.1 unknown Not tested Hrp PAI Protein 0.0 100