Gene Information

Name : Psyr_2580 (Psyr_2580)
Accession : YP_235657.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Virulence
Product : sigma-70 region 2
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 3022000 - 3022509 bp
Length : 510 bp
Strand : +
Note : -

DNA sequence : 
ATGACTGACGCAGCGACGCTATCACAGCAGACCTTGCATTCCCTGTACCGCGATCATCATGGCTGGCTGGAAAGCTGGCT
GCGCAGACGCATGGGCAATGCCTGGGATGCTGCTGACCTGAGTCAGGATACGTTTCTGCGCGTGCTGTCCAGCTCCCAGC
AGATCGCCGATATGCAGGAGCCGCGTGCCTATCTGCTGACAGTGGGCAAGCGCCTGCTCAGTAATTTCTACACTCGTCGC
AGCCTTGAACAGGCTTATCTGGAAGCGCTGGCGCAGTTGCCTGAAGAAAGCGTGCCGTCGCCGGAGCAGCGCTGGTTGCT
GCTGGAAACCCTGCAGGCGCTGGACGAGCTGCTCGATGGCCTGTCGGCAGTGGTGCGCCGGGCGTTTCTCTGGAGTCAGC
TCGAGGGGCTGGGCTATCGGGAAATCGCTGAACGCCTGAGTGTTTCCGAACGCACCGTCAAACGCTATATGGCACAAGCC
TACGAGCACTGTCTGTTGGTGGACTGGTGA

Protein sequence : 
MTDAATLSQQTLHSLYRDHHGWLESWLRRRMGNAWDAADLSQDTFLRVLSSSQQIADMQEPRAYLLTVGKRLLSNFYTRR
SLEQAYLEALAQLPEESVPSPEQRWLLLETLQALDELLDGLSAVVRRAFLWSQLEGLGYREIAERLSVSERTVKRYMAQA
YEHCLLVDW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-27 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_2580 YP_235657.1 sigma-70 region 2 VFG1049 Protein 7e-28 53