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Name : Psyr_3076 (Psyr_3076) Accession : YP_236148.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : Type I secretion system ATPase, HlyB Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 3678036 - 3680198 bp Length : 2163 bp Strand : - Note : - DNA sequence : ATGAATGATTCGGAAATGGGCACTCAAATGCCTGACAATGCCCCTCGCCTGGACACCGGCCTTGCCTCGCTGGTCATGCT TGCGCGCTTTCATCAGGTGGCGGCTTCGCCAGAGCAACTTGCCCATGAGTTTGGCAGCCCTGACCAGTATCTGTCGCAGG ACAGCCTGTTACTGGCGGCCCGTAAACTCGGCTTGAAAGCCAAGGCTGCGAGGACCACCACCGAGCGTTTGGACCGTACA CCACTTCCCGCGATAGCAGCGGACAATAACGGTGGTTTCTTCATCATCGCGCGTCTTGATCAAGGCAAGGCGCTTATCCA CGACCCTTTTTCTCAACGCCCCGAGGTTGTTACTTTCGAGGCCTTGCAGGAGCGTTGGACAGGCCAGTTACTGCTCATTC GCTCGGAGGCCGGAACGCCGGGCGAGTCTTCAAGTTTCGATTTCACCTGGTTCATTCCTGCCATCGTCAAGTACCGGAAG TTGCTGGGCGAAGTGATGCTGGTTTCCTTCGTCCTGCAAATTTTCTCGCTGATCACACCGCTGTTCTTCCAGGTAGTGAT GGACAAGGTACTTGTCCATCACGGATTGACCACCCTCGACGTTATCGCCATCGGCCTTGCCGGGGTGATGCTGTTCGAGT CGGCCTTGTCTGGCTTGCGCACCTACGTGTTCGCACACACCGCCAGCCGCATCGACGTAGAGCTGGGTTCGAAGCTGTTT CGTCACTTGATCACGTTGCCGCTCTCGTACTTTCAGGCTCGCCGCGTGGGCGATTCGGTAGCACGGGTGCGTGAACTGGA AAACATCCGCAACTTCCTGACCGGCAATGCCATCACCCTGTTGCTGGATGTGCTGTTCTCGGTGGTGTTCATTGCGGTGA TGTTTTACTACAGCGGTTGGTTGACGTTGATCGTGCTGTTGTCCCTGCCGCTCTACATTCTGGTGTCGGTGCTCATTACT CCTGTGTTGCGCAAACGCCTTAACGACAGTTTTGCCCGAGGCGCTGAGAACCAAGCGTTTCTGGTCGAAACGGTTAACGG CATCGACACCCTTAAATCGATGGCAGTGGAGCCTCAAGCCATTCGCAAGTGGGATAACCAGTTGGCGGGCTATGTCGCAG CCGGATTCAAAACTCAGAACCTGTCGACCATTGCCAACGAAAGTGTCTCTCTGATCGGCAAACTGGTGACTGTTGCAACC CTGTGGTTTGGCGCGCGTCTGGTGATTGACGGCCAACTTTCGGTCGGTCAGTTGATTGCATTCAACATGCTCGCCGGGCG TGTTGCCCAGCCGATCATGCGCCTTGCGCAACTGTGGACCAACTTCCAGCAGACCGGCGTATCGGTGCAGCGCCTGGGCG ACATCCTCAATACCCGTAACGAACTCTCGCAAGTCAACCGCAGTGCGTTACCGCCGATCAAGGGGCGCATCGAGTTTGAT CAGGTGCATTTCCGCTATCGCCCAGACGGCTCGGAGATCCTGCGGGGCATCAATCTTGTTATCACGCCAGGCCAGGTCAT CGGTGTGGTGGGGCGTTCCGGCTCTGGCAAAAGCACACTGACGCGTCTGTTACAGCGCCTTTATGTACCGGAGCGCGGTC GGGTGTTGGTAGACGGCATGGATCTGGCCCTGGCAGACGTCTCTTCCCTGCGCCGCCAGATCGGCGTGGTACTGCAAGAC AATATGCTGTTCAACCGCAGCATTCGCGAAAACATCGCCTTGAGTGATGCCGGAGCGCCTTTGGAAGCCGTGATGCAAAT GGCCAAACTGGCTGGCGCCCACGACTTCATCCTTGAGCTGCCGGAGGGCTACGACACAATGGTCGGTGAGCACGGTGCGT CGTTATCCGGCGGTCAGCGCCAACGTATCGCTATCGCCCGCGCCCTGATGGGCAACCCGCGCATCCTGATTTTCGACGAG GCCACCAGTGCGCTGGACTATGAGTCCGAGCGCATTGTTCAGCAGAACATGCAGGCCATCTGCAAGGGGCGCACGGTGAT CATCATCGCGCATCGGCTGTCTGCCGTTCGCGATGCCAACCGCATCGTTGTAGTCGATCGCGGGCAAATTGTAGAGCAGG GCACTCATGCCGAATTGCTCACACATCAAGCAGGTCATTACTCGCGCCTTCATCGCCTGCAGCAGGGAGGCAGCCATGTC TAA Protein sequence : MNDSEMGTQMPDNAPRLDTGLASLVMLARFHQVAASPEQLAHEFGSPDQYLSQDSLLLAARKLGLKAKAARTTTERLDRT PLPAIAADNNGGFFIIARLDQGKALIHDPFSQRPEVVTFEALQERWTGQLLLIRSEAGTPGESSSFDFTWFIPAIVKYRK LLGEVMLVSFVLQIFSLITPLFFQVVMDKVLVHHGLTTLDVIAIGLAGVMLFESALSGLRTYVFAHTASRIDVELGSKLF RHLITLPLSYFQARRVGDSVARVRELENIRNFLTGNAITLLLDVLFSVVFIAVMFYYSGWLTLIVLLSLPLYILVSVLIT PVLRKRLNDSFARGAENQAFLVETVNGIDTLKSMAVEPQAIRKWDNQLAGYVAAGFKTQNLSTIANESVSLIGKLVTVAT LWFGARLVIDGQLSVGQLIAFNMLAGRVAQPIMRLAQLWTNFQQTGVSVQRLGDILNTRNELSQVNRSALPPIKGRIEFD QVHFRYRPDGSEILRGINLVITPGQVIGVVGRSGSGKSTLTRLLQRLYVPERGRVLVDGMDLALADVSSLRRQIGVVLQD NMLFNRSIRENIALSDAGAPLEAVMQMAKLAGAHDFILELPEGYDTMVGEHGASLSGGQRQRIAIARALMGNPRILIFDE ATSALDYESERIVQQNMQAICKGRTVIIIAHRLSAVRDANRIVVVDRGQIVEQGTHAELLTHQAGHYSRLHRLQQGGSHV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 0.0 | 59 |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 0.0 | 59 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psyr_3076 | YP_236148.1 | Type I secretion system ATPase, HlyB | VFG1269 | Protein | 0.0 | 60 |
| Psyr_3076 | YP_236148.1 | Type I secretion system ATPase, HlyB | VFG1501 | Protein | 0.0 | 59 |
| Psyr_3076 | YP_236148.1 | Type I secretion system ATPase, HlyB | VFG0907 | Protein | 0.0 | 59 |
| Psyr_3076 | YP_236148.1 | Type I secretion system ATPase, HlyB | VFG1557 | Protein | 0.0 | 59 |
| Psyr_3076 | YP_236148.1 | Type I secretion system ATPase, HlyB | VFG0841 | Protein | 0.0 | 57 |
