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Name : Psyr_3331 (Psyr_3331) Accession : YP_236401.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 3985744 - 3987243 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGAACATTCTGTACGACGAACGCATCGACGGCGTGCTGCCTGCCGTCGACAAGCAGCAACTGTTGCAGGCGCTGCAACA GCAGTTGCCCGACCTGGACATCCTGCATCGCCCCGAAGAGCTGCGGCCTTATGAGTGCGACGGGTTGTCAGCCTATCGCA CCACACCGATGCTGGTGGCGTTGCCGCGTCATGTGGAAGAAGTCCAGACGCTGCTCAGGCTGTGCCACGCACGGCGCGTA CCGGTGGTCGCTCGTGGGGCGGGCACCGGGCTGTCGGGTGGCGCGCTGCCGCTGGAAAAAGGCGTGCTGCTGGTCATGGC GCGCTTCAATCAGATCCTCGAGATCGACCCTTCGGCGCGCCTGGCGCGGGTTCAGCCCGGCGTGCGCAACCTGGCCATTT CCCAGGCGGCAGCGCCCCACGGCCTGTATTACGCGCCAGACCCGTCCTCGCAAATCGCCTGCTCCATCGGCGGCAATGTG GCGGAAAATGCCGGCGGCGTGCACTGCCTCAAGTACGGGCTGACCGTGCATAACCTGCTCAAGGTCGAGATCCTGACGGT GGAAGGCGAGCCCATGACGCTGGGCAGCGACACGCTGGACTCGCCGGGCTTCGACCTGCTGGCACTGTTCACCGGCTCCG AAGGCATGCTCGGCGTCATTACCGAAGTCACCGTCAAGTTGTTGCCCAGACCGCAAGTGGCCAAAGTACTGCTGGCAGCG TTCGATTCCGTGGAAAAGGCCGGACGTGCAGTGGCCGATATCATTGCGGCGGGCATCATCCCCGGCGGGCTGGAGATGAT GGACAATCTGGCGATTCGTGCCGCCGAGGATTTCATTCACGCAGGCTACCCGGTCGATGCCGAAGCCATCCTGCTCTGCG AACTGGACGGCGTCGAAGCCGATGTGCACGCTGACTGCGAACGGGTCAGCGAGGTCTTGACACGGGCGGGCGCCACCGAC GTGCGCCAGGCGAAAGACGAGGCCGAACGGGTCCGCTTCTGGGCCGGGCGCAAAAACGCTTTCCCGGCCGTGGGTCGCCT GTCGCCGGATTACTACTGCATGGACGGGACCATCCCGCGCCGTGAGCTGCCGGGCGTATTGCGCAGCATCAGGGAGTTAT CCGGGCAATACGGCTTGCGTGTCGCCAACGTGTTTCATGCCGGTGACGGCAACATGCACCCGCTGATCCTGTTCGACGCC AATCAACCGGGTGAGCTGGAGCGCGCCGAGGCACTGGGCGGCAAAATCCTTGAGCTGTGCGTCAAGGTTGGCGGCAGCAT CACCGGCGAGCACGGTGTCGGTCGCGAGAAGATCAATCAGATGTGCGCCCAGTTCAATAGCGACGAGCTGACCTTCTTCC ATGCCATCAAGGCGGCATTCGACGCCAGCGGTCTGCTCAACCCTGGCAAGAACATCCCGACCCTGCACCGTTGCGCGGAA TTTGGTGCCATGCACATCCACGCCGGGCAATTGCCGTTCCCCGACCTGGAGCGCTTCTGA Protein sequence : MNILYDERIDGVLPAVDKQQLLQALQQQLPDLDILHRPEELRPYECDGLSAYRTTPMLVALPRHVEEVQTLLRLCHARRV PVVARGAGTGLSGGALPLEKGVLLVMARFNQILEIDPSARLARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNLLKVEILTVEGEPMTLGSDTLDSPGFDLLALFTGSEGMLGVITEVTVKLLPRPQVAKVLLAA FDSVEKAGRAVADIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVDAEAILLCELDGVEADVHADCERVSEVLTRAGATD VRQAKDEAERVRFWAGRKNAFPAVGRLSPDYYCMDGTIPRRELPGVLRSIRELSGQYGLRVANVFHAGDGNMHPLILFDA NQPGELERAEALGGKILELCVKVGGSITGEHGVGREKINQMCAQFNSDELTFFHAIKAAFDASGLLNPGKNIPTLHRCAE FGAMHIHAGQLPFPDLERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 0.0 | 81 |
