Gene Information

Name : Psyr_3391 (Psyr_3391)
Accession : YP_236461.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Virulence
Product : cytochrome c-type biogenesis protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 4049235 - 4050038 bp
Length : 804 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAGCAACGCCATGAAAAGCAGCATCGGTTGGGCCTGGCTGCACACGCTCGGCTCGCCGAAAGGTTTTTATCGCGT
CAGCGCACGCCTGCTGCCCTGGATGAGTGTTGTCGCTGTGCTGTTGCTGGTCATCGGCATGGTCTGGGGCCTGGCGTTCG
CGCCGCCGGATTACCAGCAGGGCAACAGCTTCCGGATCATTTATATCCACGTACCTGCCGCGATGCTCGCCCAGTCCTGT
TACGTCATGCTGGCCGTGTGCGGGCTGGTCGGGCTGGTCTGGAGAATCAAGCTGGCCGATGTCGCGCTGCACTGCGCTGC
ACCCATCGGCGCGTGGATGACCGCGCTGGCGCTGGCGACCGGCGCGATCTGGGGCAAGCCCACCTGGGGGGCATGGTGGG
TCTGGGACGCGCGACTGACCTCGATGCTGATTCTGCTGTTCCTGTATTTCGGCCTGATCGCGCTGGGCAATGCCATCAGT
AACCGCGACAGCGCCGCCAAGGCCTGCGCGGTGCTGGCGATCGTCGGCGTGGTGAACATTCCGATCATCAAGTATTCGGT
CGAGTGGTGGAACACCCTGCATCAGGGGTCGACGTTCAGCCTCACGGAGAAACCCGCCATGCCGGCTGAAATGTGGCTGC
CGCTGCTGTTCACCACGCTGGGTTTCTACTGCTTGTTCGGCGTGCTGTTGATGATGCGCATGCGTCTTGAAGTGTTGCGT
CGCGAAGCGCGCACCCAGTGGGTCAAGGCCGAGATTCTGCGCAGCCTGGGGCACACAGCAGCGCAGTCGGAGAACACGCT
TTGA

Protein sequence :
MKSNAMKSSIGWAWLHTLGSPKGFYRVSARLLPWMSVVAVLLLVIGMVWGLAFAPPDYQQGNSFRIIYIHVPAAMLAQSC
YVMLAVCGLVGLVWRIKLADVALHCAAPIGAWMTALALATGAIWGKPTWGAWWVWDARLTSMLILLFLYFGLIALGNAIS
NRDSAAKACAVLAIVGVVNIPIIKYSVEWWNTLHQGSTFSLTEKPAMPAEMWLPLLFTTLGFYCLFGVLLMMRMRLEVLR
REARTQWVKAEILRSLGHTAAQSENTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 4e-41 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_3391 YP_236461.1 cytochrome c-type biogenesis protein CcmC VFG1856 Protein 2e-46 55