|
Name : Psyr_4337 (Psyr_4337) Accession : YP_237405.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : AMP nucleosidase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0775 EC number : 3.2.2.4 Position : 5188303 - 5189766 bp Length : 1464 bp Strand : - Note : Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile DNA sequence : GTGACCCAAGCCTTTGTTGTTGTCGACACCGCCGAGCAGGCTGTAGAACGGCTCGCCGAGCTGCATGAACGCGCTACCAG TGCGTTGAGTCAGGCGCTCAAGCGCTACCTGAAAGACCGCGTCGAACCCACCGCCGAAGAGCGCGCGCAATTCAGCTACC CGGAACTGCGCCTGATCTACAAATGCCAGGGCGAAGTGCCGGTGACCACCCGTGCCTACGCCAAGGTGCAGCTGCCGGGC ACCTACAGCGTTACCGTCACGCAGCCCAAAGCCTTCAAAAAGTACCTGCTCGAACAGCTCGTTCCGCTGATGAACGATTT CACCGTGACGGTCGAAGTCGGCATGAGCGAGCAGAGCATTCCTTATCCTTACGTGGTCGAGCAGGGCGATGAACTGGCCG GCACGGGCGTCACCGCTGCGGCGCTGGCGCGGGTGTTCCCGAGTACCGACCTGTCGGCCGCCACCGATGGCATTGCCGAC GGCCTGTATGACTGGGCCAATGTCGACCCGCTGCCACTGGCGCTGTTCGACGCTGCGCGGGTGGATTTCTCGCTGCGCCG TCTGGTGCATTACACCGGCAGCGACTGGCGCCACGTACAGCCGTGGATTCTGCTGACCAACTATCACCGCTATGTCGACC AGTTCATTCTGCACGGCCTGGAAAAGCTTCGCGAAGACCCGCGTTTCGTGCGCATGGTCCTGCCGGGTAACGTGGTAGTC GACAAGAGCATGGGCCAGGACGAAGCCCAGGCCATCGTCGCCAGCGTGGTCTGGCACCGCTATCAGATGCCGGCCTACCA CCTGATCGCCGAAGACGGTCATGGCGTGACGCTGGTCAACATCGGCGTCGGCCCGTCCAATGCCAAGAACATCACCGATC ACCTCGCTGTACTGCGTCCGCATTGCTGGCTGATGATCGGTCACTGCGGTGGCCTGCGTCAGTCGCAGACCATCGGCGAT TACGTGCTGGCCCACGCCTACATGCGTCGCGACGGGATTCTCGACCGTGTGCTGCCGCCGCATATCCCGATTCCGGCCCT GGCCGAAGTGCAGCTGGCCCTGCAGGAGTCGGCTGCGCAGATTACCGGCGAACGCGGCGAAGAGCTCAAGAAGCGCCTGC GCACCGGCACGGTGTTGACCTATGACGACCGTAACTGGGAACTGCGCTGGGCGCAGGAACGTCCGCTGATCAACCTGTCG CGCGCAGTGGCGGTCGACATGGAAAGCGGCACCATCGCCGCTCAGGGTTATCGCCTGCGTGTGCCTTACGGCACCTTGCT GTGCGTATCCGACAAGCCGTTGCACAGCGAAATCAAGCTGCCGGGTTCGGCGAATGCGTTCTACGAACGTGCGGTGAGCC AGCACTTGAAGATCGGCATCGCTGCGCTGGACCTGCTGCGCACCGAGCTGAACTCGCTGCACTCACGCAAATTGCGCAGC TTCGACGAGCCGCCATTCCGTTGA Protein sequence : MTQAFVVVDTAEQAVERLAELHERATSALSQALKRYLKDRVEPTAEERAQFSYPELRLIYKCQGEVPVTTRAYAKVQLPG TYSVTVTQPKAFKKYLLEQLVPLMNDFTVTVEVGMSEQSIPYPYVVEQGDELAGTGVTAAALARVFPSTDLSAATDGIAD GLYDWANVDPLPLALFDAARVDFSLRRLVHYTGSDWRHVQPWILLTNYHRYVDQFILHGLEKLREDPRFVRMVLPGNVVV DKSMGQDEAQAIVASVVWHRYQMPAYHLIAEDGHGVTLVNIGVGPSNAKNITDHLAVLRPHCWLMIGHCGGLRQSQTIGD YVLAHAYMRRDGILDRVLPPHIPIPALAEVQLALQESAAQITGERGEELKKRLRTGTVLTYDDRNWELRWAQERPLINLS RAVAVDMESGTIAAQGYRLRVPYGTLLCVSDKPLHSEIKLPGSANAFYERAVSQHLKIGIAALDLLRTELNSLHSRKLRS FDEPPFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| amn | YP_853085.1 | AMP nucleosidase | Not tested | PAI IV APEC-O1 | Protein | 5e-116 | 54 |
