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Name : Psyr_4731 (Psyr_4731) Accession : YP_237796.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 5608757 - 5609275 bp Length : 519 bp Strand : - Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : GTGTCGTCAGTCCCAAGCACTCATAGCGAGATCGTTGGTGCGCTGTATCGCGATCATCGCGGCTGGCTGCTGGCCTGGCT CAGACGCAATGTCGCCTGCCCGCAACGTGCTCAGGATTTGAGTCAGGACACGTTCGTGCGCTTGCTGGGGCGCCATGAAT TGCTTGCGCCCAGAGAACCGCGTGCTTTCCTGGCAACCGTCGCCAAAGGGTTGATGTTCGATCACTTCCGACGCGCTGCG CTGGAGCAGGCTTACCTCGGGGAATTGATGCAGGTGCCCGAGGCCGAGCAGCCCTCTCCGGAAGAGCAGCTGCTGATTGT GGAAGACCTCAAGGCCATCGACCGCATGCTCGGCACGCTGTCCAGCAAAGCGCGTGCAGCTTTTCTATACAGTCGCCTCG ACGGCATGAGTCACGCCGAGATTGCCGAGCAGCTGGGCGTTTCGGTCTCGCGCGTCAGGCAGTACCTGGCTCAGGCCATG CGTCAGTGCTACGTGGCGCTCTACGGTGAGCCGACGTGA Protein sequence : MSSVPSTHSEIVGALYRDHRGWLLAWLRRNVACPQRAQDLSQDTFVRLLGRHELLAPREPRAFLATVAKGLMFDHFRRAA LEQAYLGELMQVPEAEQPSPEEQLLIVEDLKAIDRMLGTLSSKARAAFLYSRLDGMSHAEIAEQLGVSVSRVRQYLAQAM RQCYVALYGEPT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 2e-32 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psyr_4731 | YP_237796.1 | RNA polymerase sigma factor | VFG1049 | Protein | 8e-33 | 46 |
