Gene Information

Name : Psyr_5054 (Psyr_5054)
Accession : YP_238119.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3781
EC number : -
Position : 5996327 - 5997214 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :
TTGCAGCAAACGATCATTTCGAAAATCCGTTTTCTCGGCAAGACCATCGGCTATGTAGGATGGTCGCTTTTCTGGCTGTT
GATCTGGGACGTGATTGTCACGGTCGACTTCATGCTCTACCTGGAACGCAAGATCACCTTGCCGTCCATGCCGTTGACCC
TGCTGGGCTCGGCGCTGGTGGTGCTGACCAGCTTTCGCAATTCAAGTGCCTATAACCGCTGGTGGGAAGCCAGGACGCTG
TGGGGTGCGCTGGTCAACAGTTCACGCAGCTTCGCTCGGCAAGTGCTGACGCTGGTCGAGGATGACGACGGGATCAACCC
GGTCAAGGCCACGCTGTTGCGTCGTCACGTCGCCTATGTGAAGTGCCTGTCTGCGCACCTGAAGGGCGCCAAGTGTGGTG
ACGAGGTGCAGATGCTGATCCCTCGCGAGGAATTCGAACGTCGTCACGACACCAACAATTTTCCTAACGACCTGCTCAAT
ACGTCGGCGGCGCTGTTGGCCAAGGAGTATCAGGCCGGGCGGCTCGACAGCATTCGTCTGGCGCGTCTGGAGTCGACCAT
GGTGGATATCTCCAATTGTCAGGGCGGCATGGAGCGTATTGCCAATACACCGTTGCCTTATCCGTACGTGGCCTTTCCGC
GCCTGTTCATCACGCTGTTCTGTCTGATCGTACCGATTGGCCTGGTGGAGACCCTTGGCTGGTTCACGCCACTGGCGTCG
ACGGTGGTGGGTTTCATGCTGTTGGCGATCGAGAAGATCGGCACCGACCTGCAGAGCCCGTTCCGTGCCAGTGAACATGA
GATTCAGATGACGGCGTTGTGCGAAAACATCGAGCGCAATCTGGATTCGATGCTCAGGGGCGCGCAGGAAGAATGCAAGG
CTTCATGA

Protein sequence :
MQQTIISKIRFLGKTIGYVGWSLFWLLIWDVIVTVDFMLYLERKITLPSMPLTLLGSALVVLTSFRNSSAYNRWWEARTL
WGALVNSSRSFARQVLTLVEDDDGINPVKATLLRRHVAYVKCLSAHLKGAKCGDEVQMLIPREEFERRHDTNNFPNDLLN
TSAALLAKEYQAGRLDSIRLARLESTMVDISNCQGGMERIANTPLPYPYVAFPRLFITLFCLIVPIGLVETLGWFTPLAS
TVVGFMLLAIEKIGTDLQSPFRASEHEIQMTALCENIERNLDSMLRGAQEECKAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96112.1 Pspto1371-like protein Not tested T-PAI Protein 9e-80 65
unnamed AAT96095.1 Pspto1371-like protein Not tested T-PAI Protein 1e-79 64
unnamed AAT96051.1 Pspto1371-like protein Not tested T-PAI Protein 1e-79 64
unnamed AAT96224.1 Pspto1371-like protein Not tested T-PAI Protein 2e-80 64
unnamed AAT96170.1 Pspto1371-like protein Not tested T-PAI Protein 2e-80 64
PSPTO_1371 NP_791198.1 effector locus protein Not tested Hrp PAI Protein 2e-86 63
unnamed AAF71505.1 unknown Not tested Hrp PAI Protein 1e-86 63