Gene Information

Name : XC_0556 (XC_0556)
Accession : YP_241657.1
Strain : Xanthomonas campestris 8004
Genome accession: NC_007086
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 665245 - 665754 bp
Length : 510 bp
Strand : +
Note : -

DNA sequence :

GTGTCGGCCACGCAAGTCGCGCTTCAGCAGCAGGTGGAGCGCCTGTACACCGACCACCACGGCTGGCTACAGGGCTGGTT
GCGGCGCAAGCTGGGCGACGGGTGCGTGGCGGCCGACCTGGCCCAGGACACCTTCATCAGCGTGATCGATGCCGGCGCGG
CCGACCAGATCCGCGAGCCGCGGCCGTTCCTGGCCACCATCGCGCGGCGGCTGATGGCGCACCGCCAGCGGCGCAAGCTG
CTGGAGGCCAGCTACCTGGAGATGCTGGCCACGTTGCCGGAAGAGCTGGCGCCTTCGCCGGAGCTGCACCTGCTGGCGCT
GGAGGCGGTGCAGCAGCTGGACCAGGCGCTGGACGGCCTGCCGCCGAAAGTGAAGGAGGCCTTCCTGCTGGCGCACCTGC
ACGAGCTCAGCTACGCGCAGATCGCGCAGCGCCTGGGGGTGTCCAGCAGCTCGGTCAAGCAATACCTCACGCGCGCCAAC
CGGCAGTGCCTGTTCGCTGTGTCGGCCTGA

Protein sequence :

MSATQVALQQQVERLYTDHHGWLQGWLRRKLGDGCVAADLAQDTFISVIDAGAADQIREPRPFLATIARRLMAHRQRRKL
LEASYLEMLATLPEELAPSPELHLLALEAVQQLDQALDGLPPKVKEAFLLAHLHELSYAQIAQRLGVSSSSVKQYLTRAN
RQCLFAVSA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-36	54

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
XC_0556	YP_241657.1	RNA polymerase sigma factor	VFG1049	Protein	5e-37	54