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Name : rnhA (RF_0180) Accession : YP_246196.1 Strain : Rickettsia felis URRWXCal2 Genome accession: NC_007109 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 200109 - 200567 bp Length : 459 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGGATTCAAAAGTAGTTATATATACTGATGGTGCATGTGCAGGTAATCCTGGTCCTGGAGGATGGGGAGCTTTGCTTCA ATTTAATGATACTAGCAAAGAAATATTTGGGTATGAGTTGGATACGACTAATAATCGTATGGAAATTACGGCAGCACTTG AAGCATTAAGGATTTTAAAAAAATCTTGTAATGTTGAGATTTATACTGATAGTAAATATTTGCAACAGGGAATTACCGCT TGGATTCATAATTGGATAAAAAATAATTGGTGTAAAAGCAACAATGAACCCGTTAAAAATGCCGATTTATGGCAAAAATT ATACGCAGAATTGAGTAAACATACTATTATTTGGAAATGGGTAAAAGGTCATGCAAATAATAGCGGTAATATTGCTGCCG ATAAACTTGCAGTGCAAGGAAGAGAAACTGCTATAGAAATTTTAAAATGTCGTGGATAG Protein sequence : MDSKVVIYTDGACAGNPGPGGWGALLQFNDTSKEIFGYELDTTNNRMEITAALEALRILKKSCNVEIYTDSKYLQQGITA WIHNWIKNNWCKSNNEPVKNADLWQKLYAELSKHTIIWKWVKGHANNSGNIAADKLAVQGRETAIEILKCRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-29 | 47 |
