Gene Information

Name : Psyc_1643 (Psyc_1643)
Accession : YP_264925.1
Strain : Psychrobacter arcticus 273-4
Genome accession: NC_007204
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 2031762 - 2033966 bp
Length : 2205 bp
Strand : -
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGAGCCAGTCTTCTAATGCCAATCGCGTTCAAAAAGGCATTCTTGCCATTGATCAGCAGCTGTTCGATTTTATCGAAAA
TGAAGTGCTGCCGAAAGTCGGTATTGATTCAGACGGTTATTGGTCAGGTTTTGAAAAGGTCATTAAAGAGTTTACGCCAC
GTAATAAAGCGCTGCTTGCAACCCGCGATAATATTCAAGCGAAAATTGACCAATGGCACCTGCAACACCCTGCCAAAAAT
GGCGATATTGATTATCCAGTGTATAAGGCATTTTTACAAGAAATTGGTTATCTCTTACCAGAAGGCGAAGCGTTCAGCGT
CAGCACAGAAAACGTCGATGATGAGATTGCACTCATTGCAGGACCGCAGTTGGTAGTGCCAGTACGTAATGCTCGTTATG
CTTTGAATGCCAATAATGCGCGTTGGGGCAGCTTATATGATGCTTTATATGGCACCAATGTTATCAGTGATGAAAATGGT
CAAGAAGCGAAAGGCGGTTATAACCCAACACGCGGCGCTGCGGTCGTCGCTTATGCCAAAAATTTCTTAGATGAAAACTT
TACGCTAGCATCAGGATCATATAGCGATGTAACTGGTTTTAAAGTGGTCGATGGCAAGCTTGAAATTGCTCAAGGTGATA
GCAGCACGCAGCTGAAAAATGCCGCACAGTTTGCAGGTTTCGTTGGCGATGCCAGCAGTCCTAGCGCTGTATTAGTAAAG
AACAACAACTTGCATGCTGAGATTCAAATTGATAGCAATCATCCCATTGGTAAAGATGATCCTGCCAATATCAAGGACGT
CTTATTAGAATCAGCGCTGACCGCGATTCAAGATTGTGAAGACTCAATTGCTGCTGTCGATGCCGAAGAAAAGGTTGAGG
CTTATCGCAACTGGTTTGGCTTAATGAACGGCGATTTGCAAGAAACCTTTGAGAAAGGCGGTAAAACCCGCACCCGTAAA
CAAAATCCTGATCGCAAATATACCACGCCAGAGGGTGATACGCTGACCTTGCCAGGTCGCGCGCTCTTATTGCTGCGTAA
CGTCGGTCATCTCATGCAAAATCCATCGATTTTGGTAGATTTGGGCAATGGGCAAGAAGAAGTTTTCGAAGGTTTGATGG
ATGCTTTGATTACGCCTTTATTATCATTAAATGATTTGAACGGTAAAACTGAGCTATCAAACTCGCGTAAAGGCTCGATG
TATATCGTCAAACCAAAAATGCATGGTCCAGACGAAGTGAAAATGGCGAATGACTTATTTAACGCCTCAGAAGATTTATT
GGGCTTAGAGCGTCATACTATAAAGATTGGCATCATGGATGAAGAGCGTCGTATGACGGTCAACTTAAAAGAAGCCATCC
GCCAAGCAAAAGAGCGGGTTATTTTCATCAATACTGGCTTTTTAGATCGTACCGGTGATGAGATGCACACCAGTATGAAT
GCAGGTCCATTTGTCCGCAAAGACGATATGAAGTCGCAAACGTGGCTACTAGCCTATGAGCAGCGGAACGTCGATATCGG
TCTGGAAGTAGGTCTACAAGGTCACGCTCAGATTGGTAAAGGCATGTGGGCAAAACCTGACGAGATGCAAGAGATGATGG
ACACCAAGATTGCCCATCCAAAGTCAGGTGCCAATACTGCGTGGGTACCGTCACCAACGGGAGCGACCTTGCACAGCATG
CACTATCATCAAGTCAATGTCGCTGAGGTTCAAGACAGCCTAAAGTCACGTACGCGCGCAAGCGTAGATGATATCTTGAC
CATTCCATTGGCAAAAAACACCAATTGGACTGAGAAAGAAAAGCAGCAAGAGATTGATAATAATGCTCAAGGCATCTTAG
GCTATGTCGTACGCTGGGTGAACCAAGGCGTTGGTTGTTCCAAAGTCCCTGATATCAATGATGTGGGCTTGATGGAAGAC
CGTGCGACGTTGCGTATCTCAAGTCAGCATATCGCCAATTGGTTACATCATAATGTGGTCAGCGAGCAGCAAGTGATGGA
CGCTATGAAACGTATGGCAAAAATCGTCGATGAGCAAAACGCTGATGATGCTGATTATCAACCGATGGCGACTGACTTTG
ACAATTCCTATGCTTTCAAAGCCGCCTGCGATTTGGTGTTTAAAGGTCGCGAGCAGCCAAGTGGCTATACTGAGCCGTTA
TTGCATCAAGCGCGTCTGGACCTAAAAGCCAGCATCGGCTGCTAA

Protein sequence :
MSQSSNANRVQKGILAIDQQLFDFIENEVLPKVGIDSDGYWSGFEKVIKEFTPRNKALLATRDNIQAKIDQWHLQHPAKN
GDIDYPVYKAFLQEIGYLLPEGEAFSVSTENVDDEIALIAGPQLVVPVRNARYALNANNARWGSLYDALYGTNVISDENG
QEAKGGYNPTRGAAVVAYAKNFLDENFTLASGSYSDVTGFKVVDGKLEIAQGDSSTQLKNAAQFAGFVGDASSPSAVLVK
NNNLHAEIQIDSNHPIGKDDPANIKDVLLESALTAIQDCEDSIAAVDAEEKVEAYRNWFGLMNGDLQETFEKGGKTRTRK
QNPDRKYTTPEGDTLTLPGRALLLLRNVGHLMQNPSILVDLGNGQEEVFEGLMDALITPLLSLNDLNGKTELSNSRKGSM
YIVKPKMHGPDEVKMANDLFNASEDLLGLERHTIKIGIMDEERRMTVNLKEAIRQAKERVIFINTGFLDRTGDEMHTSMN
AGPFVRKDDMKSQTWLLAYEQRNVDIGLEVGLQGHAQIGKGMWAKPDEMQEMMDTKIAHPKSGANTAWVPSPTGATLHSM
HYHQVNVAEVQDSLKSRTRASVDDILTIPLAKNTNWTEKEKQQEIDNNAQGILGYVVRWVNQGVGCSKVPDINDVGLMED
RATLRISSQHIANWLHHNVVSEQQVMDAMKRMAKIVDEQNADDADYQPMATDFDNSYAFKAACDLVFKGREQPSGYTEPL
LHQARLDLKASIGC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 55