Gene Information

Name : rnhA (SAR11_0126)
Accession : YP_265553.1
Strain : Candidatus Pelagibacter ubique HTCC1062
Genome accession: NC_007205
Putative virulence/resistance : Unknown
Product : ribonuclease H (RNase H)
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 135675 - 136100 bp
Length : 426 bp
Strand : +
Note : -

DNA sequence :
ATGATTAAAATTTATACAGATGGATCATGTTTAAATAACCCCGGTAATGGTGGTTGGGCTGCAATTATAAACCAAAATGG
TGAAGTCAAAGAAATTAGTGGGAGCGTAAAAGACACTACTAATAATAAAATGGAATTGATGGCTCCTATTATGGCTCTAA
AACAAATTAAACAAAATGATCAAATTGAAATCTATACCGACTCACAATATGTAAGATTAGGAATTACTGAATGGGTGCAT
AAATGGATAAAAAATAATTGGCAAACTTCAAAGAAAGAACCTGTTAAGAATAAAGAACTTTGGATACAACTATACGAGCT
AACAAATCAATTTGAAATAAAATGGATTTGGGTTAAAGCACATGCAGGTAATGCCCTAAATGAAGAAGTAGATTTACTCG
CAAAAAAAGCTGCTGAATTAAACTAA

Protein sequence :
MIKIYTDGSCLNNPGNGGWAAIINQNGEVKEISGSVKDTTNNKMELMAPIMALKQIKQNDQIEIYTDSQYVRLGITEWVH
KWIKNNWQTSKKEPVKNKELWIQLYELTNQFEIKWIWVKAHAGNALNEEVDLLAKKAAELN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 7e-26 45