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Name : glcD (SAR11_0278) Accession : YP_265702.1 Strain : Candidatus Pelagibacter ubique HTCC1062 Genome accession: NC_007205 Putative virulence/resistance : Unknown Product : (S)-2-hydroxy-acid oxidase Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 280945 - 282441 bp Length : 1497 bp Strand : - Note : GlcD DNA sequence : ATGAGTGAATTAGTTCTGCCAAAGATTGACAAAGCAACGATCAATAAAAAAGAATATATTTTTAAAAATCTTGCTAAAAT TATCAATCCAGAAAATGTTTTAAGTCATGCAGATGATATTAAACCATATGAAACTGATGCATTAGCAGCTTACACACAAA CACCACTAGCTGTTGTGATGCCGGAAAATACTGAAGAAGTAAGTAATATCTTAAAGTTTTGCCATAAAGAAAATATTAAA GTTGTACCAAGAGGTGCTGGCACTGGTCTTTCAGGGGGAGCTCTACCTTTAAATGATGCAATTTTATTAAGTCTTGGAAA ATTTAACAAAATTATAGAAATTGATTTTGAAAATAAATGTGTAGTAACCCAACCTGGTGTAACAAACTTAGGAATAACAC ATGCCGTACAACATAAAAATTTTTATTATGCACCAGACCCATCAAGTCAACTTGCATGCTCAATAGGGGGTAATGTTGCT GAAAATTCTGGAGGCGTCCATTCTCTAAAATATGGAACGACAACTAATAATATTTTAGGTGTTGAAATGGTAATGATGGA TGGAACAGTTTGTAGAGTTGGTGGAAAAACTCTTGATCAAGAAGGGTATGATCTAATGGGATTAATTTGTGGTTCAGAAG GATTATTAGGAGTGATTACTGAAGTGACAGTAAAAATTTTAAAAAACCCTCAAGTCGTTAAAGCAGCGCTAATAGGCTTT CCAACAATTGAAGAAGGTGGAAACGCAGCATCAGAAATAATTTCAAGTGGAATTGTTCCAGCAGGTATGGAAATAATGGA TAAAGCTTTGATAGAGGCAACAGATAATTTTAGTAAAGCAGGATATCCAAGAGATGCAGAGCTTTTATTAATTGTAGAAT TAGATGGAACCGAATCTGAGGTAGATGAATTATTAAAACAAGTCAGAAGTATTTGTGAAAAAAATAATTGCTCAAGTTTA AAATTGAGTAAAAATGAAAAAGAAAGACTATCATTTTGGGCAGGTAGAAAAGCAGCATTTCCAGCATGTGGAGCTATGGC ACCAGATTATTATTGTATGGACGGATCCATACCAAGAGGAAAACTTGCGGAAGCTTTACTTGAAATAAAAAGACTTTCTG AAAAATACAAATTACCTGTAGCAAATTGTTTTCATGCAGGAGATGGAAATTTACATCCATTAATAATGTTTGATGGAAGT GATAAAGAACAACTGCGAAAAACAGAGGAATTTGGAGCTGAGATACTAAAGACGTGCGTTAGATTAGGGGGAGTGATCAC TGGAGAGCATGGGGTAGGAGTAGAAAAAAGAGAACTAATGTGTGAGATGTTTAATAATACAGATATTCAACAACAATTAG ATATTAAAAAATCGCTTGATGAAAAAAATTTACTAAACCCAGGAAAAGTTTATCCAATATTAAGAAAATGTGCAGAGGAA GGAAGGGTACATGTCCACAGAAATGAAGAAAAATTCCCAGATCTTCCAAGATTCTAA Protein sequence : MSELVLPKIDKATINKKEYIFKNLAKIINPENVLSHADDIKPYETDALAAYTQTPLAVVMPENTEEVSNILKFCHKENIK VVPRGAGTGLSGGALPLNDAILLSLGKFNKIIEIDFENKCVVTQPGVTNLGITHAVQHKNFYYAPDPSSQLACSIGGNVA ENSGGVHSLKYGTTTNNILGVEMVMMDGTVCRVGGKTLDQEGYDLMGLICGSEGLLGVITEVTVKILKNPQVVKAALIGF PTIEEGGNAASEIISSGIVPAGMEIMDKALIEATDNFSKAGYPRDAELLLIVELDGTESEVDELLKQVRSICEKNNCSSL KLSKNEKERLSFWAGRKAAFPACGAMAPDYYCMDGSIPRGKLAEALLEIKRLSEKYKLPVANCFHAGDGNLHPLIMFDGS DKEQLRKTEEFGAEILKTCVRLGGVITGEHGVGVEKRELMCEMFNNTDIQQQLDIKKSLDEKNLLNPGKVYPILRKCAEE GRVHVHRNEEKFPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 9e-121 | 50 |
