Gene Information

Name : PSPPH_A0063 (PSPPH_A0063)
Accession : YP_272179.1
Strain :
Genome accession: NC_007274
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein, periplasmic
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 51922 - 52659 bp
Length : 738 bp
Strand : +
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
ATGGGTTTCTCAACAAAGGCTGCTTTCACTATCGCAGCAACTTTGCTCGCCATAGGTCCCTTAGCACAGGGAGCTGACCT
GCAGACCGACATTAACTCGCGTTCCTTTAGCGTAAATTTAGGAGCCACTCGGATCGTCTATCCGCAAAAATCATCGGGAG
AGCAACTTTCGGTTTCAAATCTGCAGGACTACCCCATCTTGGTGCAGTCGTCAGTGACCGGTGAAGATAACAAGTCAGCT
GCCCCTTTTCTGGTAACACCCCCACTATTCCGGCTCGAGGCGCATCAGCAGAGTAGACTCAGGGTTATCCGCACAGACGA
CAACTTACCAACTGATCGCGAAAGCTTGTTCTGGATGTGTGTGAAGGCCGTCCCACCCAGTGATGACGACGCTACCACGG
CTCCAGAAAAGGTTTCACTAGCCATCAACATGGCCGTTAACACCTGCGAAAAAATACTGTATCGGCCATCAGGGCTGAAA
GGAACCGCCGAGGAGGCTGCGGGTTCACTTGAATGGTCACGGCACAACAACACGCTGCAGGTTTTTAACAAGACGCCTTT
TTACATGAATCTGAAGTCGCTAATTATCGGGAAAACCGAACTGCACGAGGTTTCATATATTTCACCCTATGGTCAAGTGT
CATGGTCAATTCCTGCTGGCGCAGATGGTGATGTGATTTGGACTGTCATCAATGATCAGGGTGGGGAAAGCAGGCGTTTT
AAGGTTGCACTTATGTAA

Protein sequence : 
MGFSTKAAFTIAATLLAIGPLAQGADLQTDINSRSFSVNLGATRIVYPQKSSGEQLSVSNLQDYPILVQSSVTGEDNKSA
APFLVTPPLFRLEAHQQSRLRVIRTDDNLPTDRESLFWMCVKAVPPSDDDATTAPEKVSLAINMAVNTCEKILYRPSGLK
GTAEEAAGSLEWSRHNNTLQVFNKTPFYMNLKSLIIGKTELHEVSYISPYGQVSWSIPAGADGDVIWTVINDQGGESRRF
KVALM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 6e-57 51
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 1e-50 47
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 1e-50 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPPH_A0063 YP_272179.1 fimbrial chaperone protein, periplasmic VFG0943 Protein 2e-49 50
PSPPH_A0063 YP_272179.1 fimbrial chaperone protein, periplasmic VFG0852 Protein 9e-47 46
PSPPH_A0063 YP_272179.1 fimbrial chaperone protein, periplasmic VFG0858 Protein 3e-46 45
PSPPH_A0063 YP_272179.1 fimbrial chaperone protein, periplasmic VFG0850 Protein 5e-51 43