Gene Information

Name : Tfu_1847 (Tfu_1847)
Accession : YP_289903.1
Strain : Thermobifida fusca YX
Genome accession: NC_007333
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2154213 - 2154971 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
GTGCCTACACCCCCCGCACCTTCGGGGACCGCGGAGCCCCACGCTGTTGTCGTCCAAGGACTGACCAAGGTCTATCCGAC
CGGGGGAGAACCGGTCCGTGCCTTGGACGGGGTGGACGTGTCCTTCGCACGAGGCGCGTTCACCGCGATCATGGGGCCCT
CCGGTTCCGGGAAATCCACGCTCATGCACTGCATGGCCGGGCTGGACACGCCCACGTCCGGTTCGGTGCGCCTCGGGGCA
ACGGAACTGACCGCTTTGAGCGACAAGCAGCTGACGCTGCTGCGGCGCGACCGGATCGGTTTCGTCTTCCAGTCGTTCAA
CCTGCTGCCGATGCTCACTGCGCGGCAGAACATCCTGCTCCCCTCCCAGATCTCCAAGCGCAAAGTCGACCCGGAGCGGT
TCCGCCACATCGTGGAGGTCACCGGCCTCGCCGACCGGTTGGAGCACCTGCCCGCCAAACTGTCGGGCGGCCAGCAGCAG
CGGGTGGCGGTGGCCCGGGCCCTCGTGGGCTCCCCTGAAGTGCTCTACGCCGACGAGCCCACCGGCAACCTCGACTCCCG
TTCCGGCGCGGAAGTGCTGTCCTTCCTCCGCGACTCGGTCCGCGAACTAGGGCAGACCATCGTGATGGTCACCCACGACC
CGATCGCCGCCTCCTACGCCGACCGGGTGGTGTTCCTGCGGGACGGCCGGGTGGTCGACGACGTCACCCACCCCACCCCG
CAGCTCATCCTCGACCGGCTCGCTGGACTGGAGGGCTGA

Protein sequence : 
MPTPPAPSGTAEPHAVVVQGLTKVYPTGGEPVRALDGVDVSFARGAFTAIMGPSGSGKSTLMHCMAGLDTPTSGSVRLGA
TELTALSDKQLTLLRRDRIGFVFQSFNLLPMLTARQNILLPSQISKRKVDPERFRHIVEVTGLADRLEHLPAKLSGGQQQ
RVAVARALVGSPEVLYADEPTGNLDSRSGAEVLSFLRDSVRELGQTIVMVTHDPIAASYADRVVFLRDGRVVDDVTHPTP
QLILDRLAGLEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_1847 YP_289903.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-48 47
Tfu_1847 YP_289903.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-43 45
Tfu_1847 YP_289903.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-41 44
Tfu_1847 YP_289903.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-33 43