Gene Information

Name : cbdb_A839 (cbdb_A839)
Accession : YP_307898.1
Strain : Dehalococcoides sp. CBDB1
Genome accession: NC_007356
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 683848 - 684558 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAATCCCGTCTTGAAGCTATTAATATCAGCCGCTCTTTTCAAAAAGGCACCCAGTCCATACCTGTTTTAAAGGA
AATAAATCTGAGGGCAGAGCCGGGTGAAGTGGTGGTTATCCGGGGTAAAAGCGGCGCAGGCAAATCAGTGCTTCTCTGGA
TACTTTCCGGGCTGGACAATCCGGATTCAGGGCGGGTGGTTTTTGACGGGCTGGAATTAAACTCACTTGGCAACTCCCAG
CGAGCTGAACTCCGCCGCAGCCGTTTGGGTATTATCTTCCAGAATTTCAATCTGATTGGTTCGTGGACTGCATATGAAAA
TGTGGAAATCGCCCTACGCAATTCGAAGCTTTCGCCACTTGAGAAATCAAAGCGAATTAACCGGATATTGTCTGAACTGG
GGCTTTCTGACAGGCTTCAAAACCTGCCCGCTGAATTGAGTATAGGCCAACAGCAAAGGGTAGCAATTGCCCGAACACTG
GCAACCAACCCTGAACTTATACTGGCAGACGAACCCACCGGTGATGTAGACCCTGAAACAGGGGCCGAAATAATCGAGAT
GCTGCTGACACCTGTTAAGGCAGGTAAAGCAGGGCTGATAGTCGCCACCCACGGGAATTTCCCTCTGGAAATAGCTACGC
GGGTATATACCCTTGATAACGGCGTTCTGATACCATTTAAGCTTGCCAGTACACCCCATCTCCAATCCTGA

Protein sequence :
MKKSRLEAINISRSFQKGTQSIPVLKEINLRAEPGEVVVIRGKSGAGKSVLLWILSGLDNPDSGRVVFDGLELNSLGNSQ
RAELRRSRLGIIFQNFNLIGSWTAYENVEIALRNSKLSPLEKSKRINRILSELGLSDRLQNLPAELSIGQQQRVAIARTL
ATNPELILADEPTGDVDPETGAEIIEMLLTPVKAGKAGLIVATHGNFPLEIATRVYTLDNGVLIPFKLASTPHLQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbdb_A839 YP_307898.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-34 45