Gene Information

Name : pduA (SSON_2058)
Accession : YP_310949.1
Strain : Shigella sonnei Ss046
Genome accession: NC_007384
Putative virulence/resistance : Virulence
Product : propanediol utilization polyhedral bodies protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2157020 - 2157304 bp
Length : 285 bp
Strand : +
Note : Code: QC; COG: COG4577

DNA sequence : 
ATGCAACAAGAAGCGTTAGGAATGGTAGAAACCAAAGGCTTAACTGCCGCCATAGAGGCCGCAGACGCCATGGTGAAGTC
GGCAAATGTTTTGCTGGTCGGCTACGAAAAAATAGGTTCCGGGCTGGTGACCGTCATCGTTCGTGGTGATGTCGGGGCGG
TAAAAGCGGCAACAGACGCGGGTGCCGCAGCTGCGCATAACGTCGGCGAAGTAAAAGCCGTACACGTTATTCCCCGCCCA
CATACCGATGTCGAAAAAATCTTACCAAAGGGAATTAACCCATGA

Protein sequence : 
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAAHNVGEVKAVHVIPRP
HTDVEKILPKGINP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-13 66
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-12 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 5e-12 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pduA YP_310949.1 propanediol utilization polyhedral bodies protein VFG1596 Protein 2e-13 66
pduA YP_310949.1 propanediol utilization polyhedral bodies protein VFG1598 Protein 1e-12 65
pduA YP_310949.1 propanediol utilization polyhedral bodies protein VFG1597 Protein 2e-12 63