Gene Information

Name : pduJ (SSON_2065)
Accession : YP_310956.1
Strain : Shigella sonnei Ss046
Genome accession: NC_007384
Putative virulence/resistance : Virulence
Product : propanediol utilization polyhedral bodies protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2163209 - 2163484 bp
Length : 276 bp
Strand : +
Note : Code: QC; COG: COG4577

DNA sequence :
ATGAACAACGCACTAGGACTGGTTGAAACAAAAGGGTTAGTTGGCGCAATTGAAGCTGCAGATGCCATGGTTAAATCCGC
CAACGTGCAGCTGGTTGGCTATGAAAAGATTGGTTCGGGTCTGATTACGGTGATGGTCCGCGGTGATGTTGGCGCAGTAA
AGGCCGCCGTTGATGCGGGGAGCGCTGCGGCAAGCGCCGTTGGCGAAGTGAAATCCTGCCATGTCATCCCGCGCCCACAC
AGTGATGTTGAGGCTATTTTACCTAAATCGGCATAA

Protein sequence :
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASAVGEVKSCHVIPRPH
SDVEAILPKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 9e-15 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-14 66
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-14 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pduJ YP_310956.1 propanediol utilization polyhedral bodies protein VFG1596 Protein 4e-15 67
pduJ YP_310956.1 propanediol utilization polyhedral bodies protein VFG1598 Protein 1e-14 66
pduJ YP_310956.1 propanediol utilization polyhedral bodies protein VFG1597 Protein 2e-14 64