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Name : Tbd_2079 (Tbd_2079) Accession : YP_315837.1 Strain : Thiobacillus denitrificans ATCC 25259 Genome accession: NC_007404 Putative virulence/resistance : Unknown Product : preprotein translocase SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2171886 - 2173700 bp Length : 1815 bp Strand : + Note : - DNA sequence : ATGAACCGCTACCCGCTCTGGAAATACCTGCTCATCGGCGTCACGCTGGTGGTCGCATTCCTCTATACGCTGCCGAATTT CTTCGGTGAGGTGCCCGCGGTCCAGGTTTCGCCCGTGCGCACGAGCGAAACGGTCGACACAGCCCTGCTCGGCCGCGTCG AGGCGCTCCTGAAGACGGCGTCGCTGCCGACGAGCGGCGTGGAACTCGCGGGCAACAGCATCAAGGCGCGCTTCGCCAGC ACCGACGTCCAGATCAAGGCCAAGGACGTGCTGCAGAACGGGCTCGGCGAGCGCTACACGGTCGCGCTGAATCTCGTCTC GGCCTCCCCCGCGTGGCTCTCGACGCTCAACGCGCTGCCGATGTATCTGGGCCTCGACCTGCGCGGCGGCGTGCACTTCC TGCTCGAAGTCGACATGAAGGCGGCACTCGAAAAAGCCGCTGTCCGCTACCAGAACGACTTCCGCACCGAGTTGCGGGGG GACAAGATCCGCTACAGCCGGATCAGCCGCGAGGGCAACGCGGTCGTCGTCCGTTTCGCGACGCGTGACCAGCGTGACGC GGCGGCGGACAAGCTCGCTGCGGTCTTCACCGACCTCGGCTTCGCGGCCGAAGACCTCGACGACGGCTTCCTGCTGACCG CGCGCCTCAAGCCCGAAGCCGAGAAGCAGGTGCAGGAATTCGCGCTGCAGCAGAACATCACCACGCTGAGAAACCGCGTC AACGAGCTCGGGGTCGCCGAACCCGTGATCCAGCAGCAGGGCGCCAATCGCGTCGTCGTGCAGCTGCCGGGCGTACAGGA CACGGCCAAGGCCAAGGACATCCTCGGCCGCACGGCGACGCTCGAGGTGCGCATGGTCGACGAACAGGCCGATCCGCTGC TCGTCGAACAGGGCCAGGCGCCATTCGGCGCCGAGATCGTCGCCAGCCGCGAAGGCGGCAAGATCGCGGTCAAGAAGGAC GTCGTGCTGACCGGCGACTCGATCACGGACGCCGCCCCCGGTTTCGACAGCACGAGCGCGCAGGCGGCGGTGCACATCAA CCTCGACGGCAAGGGCGCGCGCATCTTCAAGGACGTGACGCGTGAGAACGTCGGCAAGCGCATGGCGATCCTGCTGATCG AAAAAGGTATCGCCGAGGCGATCACCGCGCCGGTCATCCGCGAGGAAATCGGCGGCGGCCGGGTCCAGATCACGGGCATG GAGACGGCCCAGGAAGCTTCCGACGTCGCGCTGCTGCTGCGTGCCGGCGCGCTCGCCGCGCCGATGCAGATCGTCGAGGA GCGCACGGTCGGACCGAGCATGGGCGCCGAAAACATCGAAAAAGGCTTCCATTCCAACATCTGGGGCTTCCTCGCTGTCG TCGCGTTCATGACGATCTATTACCGCGTGTTCGGCCTCTTCTCGTCGGTCGCCCTGGCGATCAACGGCTTCTTCCTGATC GCGCTGCTGTCGATGCTGCAGGCGACGCTGACGCTGCCCGGCATGGCCGCGATCGCGCTGACGCTCGGCATGGCGATCGA CGCCAACGTGCTGATCAACGAGCGCATCCGCGAAGAGCTGCGCAACGGCGCGACGCCGCAGGCCGCGATCCACGCCGGCT ACGACCGCGCCTGGGGCACGATTCTCGACTCCAACCTGACGACACTGATCGCGGGCATCGCGCTCTTCTGGCTCGGCTCG GGCCCGGTGCGCGGCTTCGCCGTCGTGCTGTGCCTCGGCATCCTGACCTCGATGTTCAGCGCGGTGACGGTGTCGCGGGC GATGGTCAACCTCACCTACGGCCGCCAGCCCCGTCTGGCCAAAGTTTCGATCTAA Protein sequence : MNRYPLWKYLLIGVTLVVAFLYTLPNFFGEVPAVQVSPVRTSETVDTALLGRVEALLKTASLPTSGVELAGNSIKARFAS TDVQIKAKDVLQNGLGERYTVALNLVSASPAWLSTLNALPMYLGLDLRGGVHFLLEVDMKAALEKAAVRYQNDFRTELRG DKIRYSRISREGNAVVVRFATRDQRDAAADKLAAVFTDLGFAAEDLDDGFLLTARLKPEAEKQVQEFALQQNITTLRNRV NELGVAEPVIQQQGANRVVVQLPGVQDTAKAKDILGRTATLEVRMVDEQADPLLVEQGQAPFGAEIVASREGGKIAVKKD VVLTGDSITDAAPGFDSTSAQAAVHINLDGKGARIFKDVTRENVGKRMAILLIEKGIAEAITAPVIREEIGGGRVQITGM ETAQEASDVALLLRAGALAAPMQIVEERTVGPSMGAENIEKGFHSNIWGFLAVVAFMTIYYRVFGLFSSVALAINGFFLI ALLSMLQATLTLPGMAAIALTLGMAIDANVLINERIREELRNGATPQAAIHAGYDRAWGTILDSNLTTLIAGIALFWLGS GPVRGFAVVLCLGILTSMFSAVTVSRAMVNLTYGRQPRLAKVSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 46 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-117 | 46 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 46 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 46 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 46 |
