Gene Information

Name : Tbd_2644 (Tbd_2644)
Accession : YP_316402.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Virulence
Product : carboxysome structural peptide CsoS1B
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2719419 - 2719793 bp
Length : 375 bp
Strand : -
Note : -

DNA sequence :
ATGGACATGGTAGTTGAAGCGCAGCGGTCGAGCGTGACAGGTACCGCCACCGGCATCGCTCTCGGCATGATCGAAACCCG
CGGTCTGGTGCCCGCCATCGAGGCGGCGGACGCCATGACCAAGGCGGCCGAAGTGCGCCTGATCGGCCGCCAGTTCGTCG
GCGGCGGCTACGTCACCGTGCTCGTGCGCGGCGAGACCGGCGCGGTCAACGCAGCGGTGCGTGCCGGTGCGGATGCCTGC
GAGCGCGTGGGCGACGGCCTCGTCGCCGCCCACATCATCGCCCGCGTGCACAACGAAGTCGAAGGCATCCTGCCGACCGA
GGCTGATGCAGGCGGCGGCGGGCGCGACGGCGAGGTGGCCTGCGTCAACTCCTGA

Protein sequence :
MDMVVEAQRSSVTGTATGIALGMIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADAC
ERVGDGLVAAHIIARVHNEVEGILPTEADAGGGGRDGEVACVNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-10 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-10 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_2644 YP_316402.1 carboxysome structural peptide CsoS1B VFG1597 Protein 5e-11 54
Tbd_2644 YP_316402.1 carboxysome structural peptide CsoS1B VFG1598 Protein 4e-10 50