Gene Information

Name : Tbd_2645 (Tbd_2645)
Accession : YP_316403.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Virulence
Product : carboxysome shell protein CsoS1A
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2719807 - 2720112 bp
Length : 306 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTACTGGAATGACGGGCATTGCCCTCGGCATGATCGAAACCCGCGGGCTGGTTCCCGCGATCGAAGCGGCGGACGC
GATGACCAAGGCGGCTGAAGTGCGCCTGATCGGCCGCCAGTTCGTCGGCGGCGGCTACGTCACCGTGCTCGTGCGCGGCG
AGACTGGCGCGGTCAACGCGGCGGTGCGCGCCGGTGCGGATGCGTGCGAGCGTGTGGGTGACGGCCTGGTCGCCGCCCAC
ATCATCGCTCGCGTGCACAGCGAGGTCGAAAACATCCTGCCGACGGCCGAAGCCGCCGCGGCCTGA

Protein sequence : 
MATGMTGIALGMIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARVHSEVENILPTAEAAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 58
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-10 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_2645 YP_316403.1 carboxysome shell protein CsoS1A VFG1596 Protein 2e-11 58
Tbd_2645 YP_316403.1 carboxysome shell protein CsoS1A VFG1597 Protein 2e-11 53
Tbd_2645 YP_316403.1 carboxysome shell protein CsoS1A VFG1598 Protein 1e-10 49