Gene Information

Name : Tbd_2646 (Tbd_2646)
Accession : YP_316404.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Virulence
Product : carboxysome shell protein, CsoS1C
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2720148 - 2720447 bp
Length : 300 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAAACGCAATGACGGGCATCGCCCTTGGAATGATTGAAACGCGTGGTCTGGTGCCGGCGATCGAAGCCGCCGACGC
CATGACCAAAGCGGCTGAAGTGCGCCTGATCGGTCGCCAGTTCGTCGGCGGCGGTTACGTCACCGTGCTCGTGCGCGGCG
AGACCGGTGCGGTCAACGCTGCGGTGCGTGCCGGTGCGGACGCTTGCGAGCGCGTGGGTGACGGCCTGGTCGCCGCCCAC
ATCATCGCCCGCGTGCACAACGAAGTCGAAAACATCCTGCCGACCGCAGCCGCGGCCTGA

Protein sequence : 
MANAMTGIALGMIETRGLVPAIEAADAMTKAAEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARVHNEVENILPTAAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-11 59
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-11 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-10 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbd_2646 YP_316404.1 carboxysome shell protein, CsoS1C VFG1596 Protein 1e-11 59
Tbd_2646 YP_316404.1 carboxysome shell protein, CsoS1C VFG1597 Protein 1e-11 54
Tbd_2646 YP_316404.1 carboxysome shell protein, CsoS1C VFG1598 Protein 8e-11 50