Gene Information

Name : glcF (Tbd_0044)
Accession : YP_313802.1
Strain : Thiobacillus denitrificans ATCC 25259
Genome accession: NC_007404
Putative virulence/resistance : Unknown
Product : glycolate oxidase iron-sulfur subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 45016 - 46248 bp
Length : 1233 bp
Strand : -
Note : -

DNA sequence :
ATGCAGACCCATCTCGCCGCCCCCTTCCGCGAGACCTCCGAAGGCGAGGTCGCCGAGCGCATCCTGCGCAATTGCGTGCA
CTGCGGCTTCTGTCTTGCGACCTGCCCGACCTACCAGCTCCTCGGCGACGAACTCGACTCACCGCGCGGCCGCATCTATC
TGATGAAACAGGTGCTCGAGGGGGCGACGCCGACGGCCCGGACCCAGCTCCACCTCGATCGTTGCCTGACCTGCCGCAAC
TGCGAGACCACCTGCCCGTCGGGGGTCGAGTACGGCAAGCTGCTCGACATCGGCCGCGCGGTCGTCGAACGCGAGGTCGG
CCGCGGCCCCGCGGACACCGCGCTGCGCGCCGCGCTCAAGAACGGCCTCGGCTCGCGCCGGCTGTTCGGCACGGCGCTGC
GGCTCGGGCGAACGCTGCGGCCGCTGTTGCCCGATTTTCTCAAGGCGCGTGTGCCGGCGGCGGACGCCGCCTCGGTCTGG
CCGCGTGCGCGTCACGACCGGCGCATGCTGGTGCTGGAAGGCTGCGTCCAGCCCGGGCTCAAGCCCAACATCAACGCCGC
CGCCGCGCGCGTCCTCGACCGCCTCGGCGTCTCGCTCTTCGCGGCGCCGGAGGCCGGCTGCTGCGGTGCGCTGGCACACC
ATCTCAACGATGCCGAAACCGCGCTCGCACTCGCACGGCGCAACATCGACGCCTGGATCCCGCACCTCGACGCCGGCGTC
GAGGCGATCGTGATGACCGCGTCGGGCTGCGGCGTCATGGTCAAGGACTACGGCTGGTTGCTGCGCGAGGATGCGGCCTA
CGCGGAAAAGGCGGCACGGGTCGCCGCGGCGACCTTCGACATTTCGGAAATCCTCGGCCGCGAACGCGCGGCGCTGCGGG
CGCTGGCCAAGCGTCCGGCATCGACGCGCATCGCCTACCACCCGCCGTGCACGCTGCAGCACGGGCAGAAGCTCGCGAGC
AGCGGGGTCGAGTCGCTGCTCGCCGACGCCGGTTTCGAATTGGGCCCGGTGGCGGAAAAACACCTGTGCTGCGGCTCGGC
GGGGACCTACTCGATCCTGCAGCCGGAGATCGCCGGCGCACTCAAGGCGCGCAAGCTCGCCCATCTGCAAGCCAGCGCAC
CTTCGGTGATCGCAACCGCGAACATCGGCTGCCTGACGCATCTGCAATCCGGTACCGCGACGCCGGTCAGGCACTGGGTG
GAACTTTTGGACGAGGCGCTGGCCGCATCCTGA

Protein sequence :
MQTHLAAPFRETSEGEVAERILRNCVHCGFCLATCPTYQLLGDELDSPRGRIYLMKQVLEGATPTARTQLHLDRCLTCRN
CETTCPSGVEYGKLLDIGRAVVEREVGRGPADTALRAALKNGLGSRRLFGTALRLGRTLRPLLPDFLKARVPAADAASVW
PRARHDRRMLVLEGCVQPGLKPNINAAAARVLDRLGVSLFAAPEAGCCGALAHHLNDAETALALARRNIDAWIPHLDAGV
EAIVMTASGCGVMVKDYGWLLREDAAYAEKAARVAAATFDISEILGRERAALRALAKRPASTRIAYHPPCTLQHGQKLAS
SGVESLLADAGFELGPVAEKHLCCGSAGTYSILQPEIAGALKARKLAHLQASAPSVIATANIGCLTHLQSGTATPVRHWV
ELLDEALAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 1e-94 54