Gene Information

Name : Nwi_1980 (Nwi_1980)
Accession : YP_318591.1
Strain : Nitrobacter winogradskyi Nb-255
Genome accession: NC_007406
Putative virulence/resistance : Virulence
Product : carboxysome structural peptide CsoS1B
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2167218 - 2167559 bp
Length : 342 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAACACACGTCAACGGCATCGCCCTGGGCATGATCGAAACTCGCGGGCTGGTTCCGGCGATCGAAGCGGCCGACGC
GATGACCAAGGCTTCCGAAGTGCGGCTGATCGGTCGGCAGTTCGTCGGTGGTGGTTACGTCACGGTGTTGGTGCGCGGCG
AAACCGGCGCGGTCAACGCGGCGGTGCGTGCCGGGGCTGACGCCTGCGAGCGCGTGGGCGACGGCCTGGTGGCCGCGCAC
ATCATCGCGCGCGTGCACAGCGAGGTTGAGGGCATCCTGCCGACGAAGCCTGACTCGAACGGCGGCGGCCGCGACGCCGA
GACCACCTCCACCCGCAGCTGA

Protein sequence : 
MATHVNGIALGMIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARVHSEVEGILPTKPDSNGGGRDAETTSTRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-10 56
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-10 52
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 8e-10 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwi_1980 YP_318591.1 carboxysome structural peptide CsoS1B VFG1596 Protein 4e-11 56
Nwi_1980 YP_318591.1 carboxysome structural peptide CsoS1B VFG1597 Protein 5e-11 52
Nwi_1980 YP_318591.1 carboxysome structural peptide CsoS1B VFG1598 Protein 3e-10 48