Gene Information

Name : EHEC-hlyA (L7048)
Accession : YP_325608.1
Strain :
Genome accession: NC_007414
Putative virulence/resistance : Virulence
Product : hemolysin toxin protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 39822 - 42818 bp
Length : 2997 bp
Strand : +
Note : 99 pct identical (0 gaps) and equal length to a protein EHEC-hlyA TRSW: Q47461

DNA sequence :
ATGACAGTAAATAAAATAAAGAACATTTTCAATAATGCGACATTGACTACAAAATCAGCATTTAATACAGCATCATCAAG
CGTACGTTCCGCTGGAAAAAAACTCATATTATTAATACCTGATAATTATGAAGCTCAGGGCGTGGGTATTAATGAGTTGG
TCAAAGCTGCTGATGAGCTTGGAATAGAAATACACCGTACTGAACGAGATGATACAGCGATTGCAAACCAGTTTTTTGGT
GCAGCAGAAAAAGTTGTAGGATTAACTGAACGTGGTGTTGCAATATTCGCACCACAACTTGACAAACTTCTGCAGAAGTA
TCAGAAAGTTGGGAGTAAAATAGGAGGAACCGCTGAAAATGTAGGTAATAATCTGGGAAAAGCCGGAACAGTTCTCTCAG
CACTACAGAATTTTACGGGGATTGCTTTATCAGGCATGGCTCTTGATGAATTGCTGAGAAAACAACGGGAAGGAGAGGAT
ATAAGTCAGAATGATATTGCCAAAAGTAGTATTGAACTTATTAATCAGCTTGTAGATACAGTATCAAGTATAAACAGTAC
CGTTGATTCATTTTCTGAGCAGCTTAACCAGCTTGGCTCATTTTTATCCAGTAAACCTCGATTAAGTTCTGTTGGTGGGA
AATTACAAAATTTACCAGACCTGGGCCCCCTGGGGGATGGGCTGGATGTTGTCTCCGGAATTCTTTCTGCTGTATCAGCA
AGCTTTATTCTGGGAAACAGTGACGCACATACAGGAACAAAAGCTGCAGCGGGTATCGAACTGACAACTCAGGTTCTTGG
AAATGTTGGTAAAGCTGTTTCGCAATATATTCTGGCTCAGAGAATGGCACAGGGGTTATCGACAACAGCTGCAAGTGCGG
GTCTGATCACATCGGCTGTTATGCTGGCTATCAGTCCTCTTTCTTTCCTGGCTGCTGCAGATAAATTTGAGCGAGCTAAG
CAGCTTGAATCATATTCTGAACGATTTAAAAAATTGAATTATGAAGGGGATGCTTTACTCGCAGCCTTTCATAAAGAAAC
CGGAGCTATAGATGCAGCCCTGACAACAATAAATACTGTCCTGAGTTCTGTATCTGCGGGAGTTAGTGCAGCCTCCAGTG
CATCCCTCATAGGGGCCCCGATAAGCATGCTGGTGAGTGCATTAACCGGTACGATATCTGGCATTCTGGAAGCATCAAAA
CAGGCTATGTTTGAGCACGTTGCAGAGAAATTCGCTGCTCGGATCAATGAATGGGAAAAGGAGCATGGCAAAAATTATTT
TGAGAATGGATATGACGCAAGACATGCTGCGTTTTTAGAAGACTCTCTGTCTTTGCTTGCTGATTTTTCTCGTCAGCATG
CAGTAGAAAGAGCAGTCGCAATAACCCAGCAACATTGGGATGAGAAGATCGGTGAACTTGCAGGCATAACCCGTAATGCT
GATCGCAGTCAGAGTGGTAAGGCATATATTAATTATCTGGAAAATGGAGGGCTTTTAGAGGCTCAACCGAAGGAGTTTAC
ACAACAAGTGTTTGATCCTCAAAAAGGGACCATAGACCTTTCAACAGGTAATGTATCAAGTGTTTTGACATTTATAACAC
CAACATTTACCCCAGGAGAAGAAGTTAGAGAAAGAAAACAGAGTGGTAAATATGAATATATGACATCTCTTATTGTAAAT
GGTAAGGATACATGGTCTGTAAAAGGCATAAAAAATCATAAAGGTGTATATGATTATTCAAAATTGATTCAGTTTGTTGA
AAAGAATAACAAACACTATCAGGCGAGAATAATTTCTGAGCTCGGAGATAAAGACGATGTGGTTTATTCTGGAGCAGGCT
CATCAGAAGTATTTGCTGGTGAAGGTTATGATACCGTATCTTATAATAAGACGGATGTTGGTAAACTAACAATTGATGCA
ACAGGAGCATCAAAACCTGGTGAGTATATAGTTTCAAAAAATATGTATGGTGACGTGAAGGTATTGCAGGAAGTCGTTAA
GGAACAGGAGGTGTCAGTAGGGAAGCGAACAGAGAAAATACAATATCGTGATTTTGAATTCAGAACCGGTGGAATTCCTT
ATGATGTAATAGATAATCTTCATTCTGTTGAAGAGCTCATTGGCGGAAAACATGATGATGAATTCAAAGGCGGTAAGTTT
AATGATATATTCCATGGCGCAGATGGGAACGATTATATCGAAGGTAATTATGGTAATGATCGACTATACGGCGATGATGG
GGATGATTATATATCCGGAGGACAGGGAGACGACCAGTTATTTGGTGGTAGTGGAAACGATAAATTGAGTGGAGGGGATG
GTAATAATTATCTGACAGGAGGAAGCGGTAATGATGAGCTTCAGGCACACGGAGCTTATAATATTCTGTCAGGTGGTACT
GGTGATGATAAACTTTATGGTGGTGGTGGTATTGATCTTCTGGATGGAGGGGAAGGTAATGACTATCTGAATGGTGGTTT
TGGTAATGATATTTATGTTTATGGGCAAAACTATGGTCATCATACAATTGCAGATGAAGGAGGTAAAGGAGATCGTTTGC
ACTTATCTGATATTAGCTTTGATGATATCGCATTTAAGAGAGTTGGAAATGATCTTATCATGAATAAAGCCATTAATGGT
GTACTTTCATTTAATGAGTCAAATGATGTCAATGGGATAACATTTAAAAACTGGTTTGCGAAAGATGCCTCAGGAGCAGA
TAATCATCTTGTTGAGGTTATAACAGATAAAGATGGTCGAGAGATAAAAGTTGATAAGATACCTCATAATAATAATGAAC
GGTCAGGTTATATAAAAGCCAGTAATATAGCATCTGAAAAAAACATGGTTAATATCACCAGTGTTGCCAATGATATTAAT
AAGATTATTTCTTCAGTTTCAGGGTTCGATTCAGGTGATGAACGATTAGCATCTTTATATAATTTATCCTTACATCAAAA
CAACACACACTCAACAACTTTAACGACAACTGTCTGA

Protein sequence :
MTVNKIKNIFNNATLTTKSAFNTASSSVRSAGKKLILLIPDNYEAQGVGINELVKAADELGIEIHRTERDDTAIANQFFG
AAEKVVGLTERGVAIFAPQLDKLLQKYQKVGSKIGGTAENVGNNLGKAGTVLSALQNFTGIALSGMALDELLRKQREGED
ISQNDIAKSSIELINQLVDTVSSINSTVDSFSEQLNQLGSFLSSKPRLSSVGGKLQNLPDLGPLGDGLDVVSGILSAVSA
SFILGNSDAHTGTKAAAGIELTTQVLGNVGKAVSQYILAQRMAQGLSTTAASAGLITSAVMLAISPLSFLAAADKFERAK
QLESYSERFKKLNYEGDALLAAFHKETGAIDAALTTINTVLSSVSAGVSAASSASLIGAPISMLVSALTGTISGILEASK
QAMFEHVAEKFAARINEWEKEHGKNYFENGYDARHAAFLEDSLSLLADFSRQHAVERAVAITQQHWDEKIGELAGITRNA
DRSQSGKAYINYLENGGLLEAQPKEFTQQVFDPQKGTIDLSTGNVSSVLTFITPTFTPGEEVRERKQSGKYEYMTSLIVN
GKDTWSVKGIKNHKGVYDYSKLIQFVEKNNKHYQARIISELGDKDDVVYSGAGSSEVFAGEGYDTVSYNKTDVGKLTIDA
TGASKPGEYIVSKNMYGDVKVLQEVVKEQEVSVGKRTEKIQYRDFEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKF
NDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGT
GDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLSDISFDDIAFKRVGNDLIMNKAING
VLSFNESNDVNGITFKNWFAKDASGADNHLVEVITDKDGREIKVDKIPHNNNERSGYIKASNIASEKNMVNITSVANDIN
KIISSVSGFDSGDERLASLYNLSLHQNNTHSTTLTTTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyA NP_755445.1 hemolysin A Virulence PAI I CFT073 Protein 0.0 62
hlyA CAD33759.1 hemolysin A Virulence PAI I 536 Protein 0.0 62
hlyA CAD42039.1 HlyA protein Virulence PAI II 536 Protein 0.0 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EHEC-hlyA YP_325608.1 hemolysin toxin protein VFG0840 Protein 0.0 100
EHEC-hlyA YP_325608.1 hemolysin toxin protein VFG1558 Protein 0.0 62
EHEC-hlyA YP_325608.1 hemolysin toxin protein VFG1500 Protein 0.0 62
EHEC-hlyA YP_325608.1 hemolysin toxin protein VFG0906 Protein 0.0 62