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Name : glcD (BURPS1710b_3342) Accession : YP_334713.1 Strain : Genome accession: NC_007434 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 3663216 - 3664709 bp Length : 1494 bp Strand : + Note : identified by match to protein family HMM PF01565; match to protein family HMM PF02913 DNA sequence : ATGAACGCCCCCGCCGAACTGTCGGCCGATCTGCGCGCGCAGCGCCAGCGCGAAGTCGTGCAGGCGCTGATGGCCGTGCT GCCGACCCATTGCCTGCTGCATCGCGACGAGGACACGGCCGCGTACGAATGCGATGCGCTGTCCGCGTACCGCCGGCTGC CGCTCGCGGTGGCGCTGCCGGAGACCGAATCGCAGGTGCAGCGGATCGTGCAGATCTGCCGGCGCATGAACGTGCCGATC GTGCCGCGCGGCGCGGGCACGAGCCTGTCGGGCGGCGCGCTGCCGATCGGGCACGGCGTCGTGCTGTCGCTCGCGCGCTT CACGCGGATCGTCGAAGTCGATTCCTATGCGCGCACGGCCACCGTTCAGCCCGGCGTGCGCAATCTCGCGATCTCCGAGG CCGCCGCGCCGTACGGCCTCTACTACGCGCCCGATCCCTCGTCGCAGATCGCGTGCACGATCGGCGGCAACGTGTCGGAG AACTCGGGCGGCGTTCATTGCCTGAAATACGGGCTCACATGCCATAACGTGCTGCGCGTGCGCGGCGTGACGATCGACGG CGAGATCGTCGAGTTCGGCTCGCTCGCACCCGACGTGCCGGGCCTCGATCTGCTCGCCGTCACGATCGGCAGCGAAGGCA TGTTCATCGTCGTCACCGAGGTGACGGTGCGGCTGATCCCGAAGCCGCAGTGCGCGCAGCTCGTGATGGCGAGCTTCGAC GACGTCGTCAAGGGCGGCGAGGCCGTTGCCGCGATCATCGCGTCGGGCATCATTCCGGCCGGGCTCGAGATGATGGACAA GCCCGCGACGCAGGCGGTCGAGGCGTTCACGCACGCGGGCTACGATCTCGACGCGGCCGCGATCCTGCTGTGCGAATCGG ACGGCACACAGGAGGAAGTCGCCGAGGAGATCGTGCGGATGACCGCGGTGCTGCGCGAGCACGGCGCGACGCGCATCCAG GTCTCGCGCAGCGAGGCCGAGCGGCTGCGCTTCTGGTCGGGCCGCAAGAACGCGTTCCCGGCCGCGGGCCGCATTTCGCC CGACTATTACTGCATGGACGGCACGGTGCCGCGCCGCGCGATCGGGCCGCTCCTCGCGCGCATCGAGCAGATGGAGACGA AGTACGGGCTGCGCTGCATCAACGTGTTCCACGCGGGCGACGGCAACATGCACCCGCTCATCCTGTTCAACGCGAACGAC GTCGACGAGCTGCACCGCGCGGAGGCGTTCGGCGCGGACATCCTCGAGACCTGCGTCGAATTCGGCGGCACGGTGACGGG CGAGCACGGCGTCGGCGTCGAGAAGCTGAACTCGATGTGCGTGCAGTTCTCGCGCGAGGAGTGCGATGCGTTCTTCGCGA TCAAGCGCGCGTTCGATCCGCCCGAGCTGCTGAATCCGGACAAGGGCATTCCGACCCGCGCGCGCTGCGCCGAATACGGC CGGATGCACGTGCGCGGCGGGCTGCTGCCGCATCCGGACCTGCCGCGCTTTTGA Protein sequence : MNAPAELSADLRAQRQREVVQALMAVLPTHCLLHRDEDTAAYECDALSAYRRLPLAVALPETESQVQRIVQICRRMNVPI VPRGAGTSLSGGALPIGHGVVLSLARFTRIVEVDSYARTATVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVSE NSGGVHCLKYGLTCHNVLRVRGVTIDGEIVEFGSLAPDVPGLDLLAVTIGSEGMFIVVTEVTVRLIPKPQCAQLVMASFD DVVKGGEAVAAIIASGIIPAGLEMMDKPATQAVEAFTHAGYDLDAAAILLCESDGTQEEVAEEIVRMTAVLREHGATRIQ VSRSEAERLRFWSGRKNAFPAAGRISPDYYCMDGTVPRRAIGPLLARIEQMETKYGLRCINVFHAGDGNMHPLILFNAND VDELHRAEAFGADILETCVEFGGTVTGEHGVGVEKLNSMCVQFSREECDAFFAIKRAFDPPELLNPDKGIPTRARCAEYG RMHVRGGLLPHPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-128 | 59 |
