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Name : tcdB1 (BURPS1710b_A0161) Accession : YP_335320.1 Strain : Genome accession: NC_007435 Putative virulence/resistance : Virulence Product : TcdB1 Function : - COG functional category : - COG ID : - EC number : - Position : 215181 - 219638 bp Length : 4458 bp Strand : - Note : identified by match to protein family HMM PF01839; match to protein family HMM PF03534 DNA sequence : ATGCGTACCCCAGAGGAACCATCGGGACTTCGTCAAGGTCCGTTGAGCCTGCCCAGCGGCGGTGGTTCGATCCGCGGTAT GGGGCAAACGCTGAGCGCAATCGGGCCGGACGGCATGGCGGAAATGTCGCTGCCATTACCAATGTCGGCGGGTCGTGGCT ATGCTCCGGCGTTGGGGCTTACCTACAGTAGCGGTGCAGGCAACGGGCCATTCGGCATTGGCTGGCAGATGGGCACGATG TCGATTCGACGCCGGACGAGCCACGGTACGCCCCGTTACGATTCGACTGATAGCTTTCTTGGGCCGGATGGCGAGGTGTT GCTGGTGGCAAGCGACACAGAAGGGCAGCCGGATGTCCGCTCCGCCAACGCGTTGCAGGGTGTGATTTTGGACACACGCC ATACGATAACTCGCTATCAACCCCGAACCGAAAGAAATTTCAGCAAGATTGAGCACTGGCAGCCCTCCGACGACACCGGA GCCGGTTTTTGGTTGATCAGATCCGCCGACGGGCAGGTCCATATTCTTGGCAAAACCGCCCAAGCAAGGATATCCGCGCC GGGCAATTCAACACACGTTGCGCAATGGTTGCTGGAGGAATCGATGTCGGCGGGCGGCGAACATGTCTACTACGAATATT ATGCGGAGGACGATGTCGGTTGCAGCGCTGCCGAAAAGCACGCGCACCCAGATACCTCGGCGCAGCGTTATCTCGCGATC GTCCATTACGGCAATATCCATCCGAGTGACTGTTTGTTCGTCTTGAGCGACACCGCGCCTTCAAGCGCGGGCTGGCTGTT CGTCCTGGTGTTTGACTATGGCGAGCGCGCCGCTTCAATCGACGCGGTGCCAAAGTTCGCATCGTCCCAGCCCTGGTTGA GTCGAACTGATCCATTCTCACGCTATGAGTTCGGTTTCGAGGTCCGCACGCGGCGGCTGTGCCGGCAAGTTCTTGCTTTC CACCGTTTGCAGACGTTGGCAGGTGTGGCAAATGGAGATGACGTCCCAGCGCTCGTGCATCGTATGGTGCTGCAGTACGA CGAGAATCCGGTGGTCAGCATGCTGGTTGCTTGCCGGGTGCTCGGACACGAATTGGACGGCCGTCCAGTACCGATGCCGC CGCTGGAAATCGACTATCAGCGCTTCACCCCGACGGCCATCTGGCAACCGATGCGCGAGCTCGAAAATTTCGATCTCCCG CAACGATGGCAACTAGTCGATCTCTTCGGAGACGGGCTTGCCGGCGTGCTTTACAAGGATGACCACGCGTGGTGCTATTG TGCCCCACAGCGCCAAGAGGGCGGTGCGCCCGACGCGATCACTTGGCGCAAGAGCCACATGTTGCCACAAATCCCCGTGT TGAACGGCATGGACACGGCCACACTGATCGACGTCAATGGCGACGGCAGGCTGGAATGGCTGGTAACCCATCCAGGGCTG CAGGGCTACCACAGAGTGTTGCCCGAGGGGAAGTGGACGCATTTCACGCCACTGACCGCGTTACCGGTCGAGTATTTCCA TCCCCGAGCCCAACTTGCAGACCTGATGGGCGCCGGTTTTTCAGATCTGGTCCTGATCGGACCCAAGAGTGTGCGCCTTT ACGCGAACGAGCGCGATGGCTGGACGCAAGGCCAGACAGTCATTCAATCCGATGGCATCACGCTGCCGATTCCGGGCGCA GACGCGTGCAAATTGGTGGCATTCAGTGACGTGCTCGGCTCAGGCCAGCCGCATCTGGTTGAGATCAGCGCCGATGGGGT CACCTGCTGGCCGAATCTCGGACTTGGGCGTCTTGGCGTGCCGCTGAAACTACCCGGATTCAACCAGCCGACTGAGACGT TCGATCCGGGGCGGGTGTTCCTCGCCGATCTCGATGGATCCGGTGCCGTTGACCTGATCTATGCGCACTCGGACCATTTG CAGATTTACACGAATCAGAGCGGTAATGGATTTGCCGCGCCGCAAAGTTTGTCGTTGCCTGACGGGGCGCGATTCGACGA TACCTGCCTGCTGCAGGCCGCGGATATCCAGGGTCTGGGTGTTGTGAGTCTCGTTTTGACGATTCCACACCCGACGCCGC ACCACTGGCGTTGCGACTTGTCTCGAAACAAGCCTTGGCTGATGAGTGACGTTTGCAACAATATGGGCGCGCACACAACA TTGTACTACCGCAGCTCTGTACAGTTCTGGTTGGACGAAAAAGCTGCCGCCAATGTTGATACGCCACCCGTGACGAATCT ACCATTTCCTATTCATACATTGTGCCGTAAAGAACTGCTCGATGAAATCACTGGCAACAGGCTGGTGACGAACATGCGTT TTGCCCATGGTGTTTGGGATGGTAACGAGCGCGAGTTTCGCGGATTCGGCCGCGTGGAGCAGTTCGATACCGATATGCGC GCGTGCGGCGACGTCTCGCAGCGAACCGCACCGTCATTGACCCGAAGCTGGTTCGCGACCGGGATGCCGACGGTCGACGA GCGGCTGGCGGATGAATTCTGGCACGGTGACGCCCAAGCGTTTGCCGGGTTTTCTCCGCGCTTTACCATATGGGACACTG CCAGCGGGCACGACGAACCATTGACGCCGTCAGAGTCCGCCCGCTACTGGCTGAGTCGCGCGATGAAGGGACAGCTGCTG CGCAGCGAAGTGTACGGGCTGGACGAGACGGGATCGGAAGGAATTCCGTACACAGTAACAGAGTCGCGACTCCAGCTTCG GCTGATCGCCAGCGCCGAAACGGAACAACCCGCAGCGTGGCCATCGGTCGTGGAAATTCGCAGCTATCAGTACGAGCGCA TTGGCAGCGATCCACAGTGCTCACAGCAGGTGCAGCTGGCGCTGGACGCATTTGGCTTTCCGCTGCAAAGCGTAGCAATT GCGTATCCGAGGCGGCCGAAGCCGGTTGACAATCCGTATCCGGAGACTTTGCCAGATGCGTTGTTGGATAATAGCTACGA CGCTCAGCAGGCAAGTGTGACGCTGGTGCGGCGGACGACCCGCTACCATCACCTCACAAGCGGGGAAACGTGGCGACTCG GGCTGCCCGACTGTGAGCGCAGTGATGTCTTCACATACGAGAGCACGCGTGTGCCAGCGGACGGCTTTTCACTGGAAAAA CTATCGGGTTCGGAGAGCCTGATTGGTGCGGGTCGGCCCTTTGCGTTCGCGGGGCAGCAACAGGTTCACTACACGATGTG CCAGAGCGAGGAACCAATTGCATTTCCCACCTCGCAGGCTTTGGTTGCTTTCACCGAGACAGCGATGCTGGACGATGCGG CGCTACTTGCGTACGACGGTGTCGTCGCACCTGAAGACCTCGGTCCATTACTGCTTGAGTGCGGTTATTTACGTGTGCCC CGACTGCTCGGGGACGGTGCTGAGAACGCCGTCTGGGCGGCGAGGCGCGGCTATACCGATTACGGTGGCGCTCAGCAATT CTGGCGCCCGCTTCGTCAACGCGCATCGTTGCTCACGGGTGTCACGACATTGACCTGGGATCCGCACTACTGCGTAGTCG CCGGAACTCGTGATGCCGCGGGGTTGACCATGCAGGCGGCCTTTGATTGGCGCTTCCTGTTGCCGTTTAAGGTAACGGAT AGCAACAATAATCAGCACCATGGGGCGCTTGACGCCTTGGGGCGCTTGGTCAGTCGCCGCTTCTGGGGGACGGAAGGCGG ACTGCCTGCAGGATACTCCGCTCCAGAGGATGCTCCGTTTACCGCTCCATCATCCGTTGATGAAGCATTGGCGCTGACTC CGGGAATCCCGGTGGCGGAATGCTTCGTCATCGTGCCTGATAGCTGGATGCCGAATTTGTCCGAATCGCAGGTAAGCGAG CTGGATGGCGAAGACGCCTCGCTATGGCGCGACCTTAGGATCGCAGGTGTGGTGAGCGAGGATAATCGGGTCTGCGCGCT GGCTCGACGGCGTTGGAAGCAGCAAGGCACTGCACTCGATAGCTGGCTCGCACAGGCCCAGCGTGTCCCGCCGCATACAT TGACGTTGACGACCGATCGCTACGATACGGACCTGGCGCAGCAGTTGCGACAACAGGTGACGTTCAGCGATGGTTTTGGC CGCGTATTGCAGAGTTCGGTGCGTCACGAAGCTGGTGACGCTTGGCAACTGGCGGAGGATGGCTCGCTGGTGACGGGGGC AACCGGCGTGCCGATAACAGCGTACAGCGATTTTCGTTGGGCAGTCACTGGCCGAGTCGAGTACGACAACAAGGGGCAAG TGATGCGGGTTTATCAGCCGTACTTCCTGAACGACTGGCGCTACGTTCGGGACGACCACGCACGAGCAGATGCATTTGCC GATCGGCAGGATTACGATCCAATGGGCCGACTGATCCGAGTTGTGACGGCCAAGGGCTACTTGCGGCGGACGCAGTACTA CCCGTGGTTCGTGGTGAAGGAGGACGAAAACGACACCGAGGCGCTGGAGCAGCGGTGA Protein sequence : MRTPEEPSGLRQGPLSLPSGGGSIRGMGQTLSAIGPDGMAEMSLPLPMSAGRGYAPALGLTYSSGAGNGPFGIGWQMGTM SIRRRTSHGTPRYDSTDSFLGPDGEVLLVASDTEGQPDVRSANALQGVILDTRHTITRYQPRTERNFSKIEHWQPSDDTG AGFWLIRSADGQVHILGKTAQARISAPGNSTHVAQWLLEESMSAGGEHVYYEYYAEDDVGCSAAEKHAHPDTSAQRYLAI VHYGNIHPSDCLFVLSDTAPSSAGWLFVLVFDYGERAASIDAVPKFASSQPWLSRTDPFSRYEFGFEVRTRRLCRQVLAF HRLQTLAGVANGDDVPALVHRMVLQYDENPVVSMLVACRVLGHELDGRPVPMPPLEIDYQRFTPTAIWQPMRELENFDLP QRWQLVDLFGDGLAGVLYKDDHAWCYCAPQRQEGGAPDAITWRKSHMLPQIPVLNGMDTATLIDVNGDGRLEWLVTHPGL QGYHRVLPEGKWTHFTPLTALPVEYFHPRAQLADLMGAGFSDLVLIGPKSVRLYANERDGWTQGQTVIQSDGITLPIPGA DACKLVAFSDVLGSGQPHLVEISADGVTCWPNLGLGRLGVPLKLPGFNQPTETFDPGRVFLADLDGSGAVDLIYAHSDHL QIYTNQSGNGFAAPQSLSLPDGARFDDTCLLQAADIQGLGVVSLVLTIPHPTPHHWRCDLSRNKPWLMSDVCNNMGAHTT LYYRSSVQFWLDEKAAANVDTPPVTNLPFPIHTLCRKELLDEITGNRLVTNMRFAHGVWDGNEREFRGFGRVEQFDTDMR ACGDVSQRTAPSLTRSWFATGMPTVDERLADEFWHGDAQAFAGFSPRFTIWDTASGHDEPLTPSESARYWLSRAMKGQLL RSEVYGLDETGSEGIPYTVTESRLQLRLIASAETEQPAAWPSVVEIRSYQYERIGSDPQCSQQVQLALDAFGFPLQSVAI AYPRRPKPVDNPYPETLPDALLDNSYDAQQASVTLVRRTTRYHHLTSGETWRLGLPDCERSDVFTYESTRVPADGFSLEK LSGSESLIGAGRPFAFAGQQQVHYTMCQSEEPIAFPTSQALVAFTETAMLDDAALLAYDGVVAPEDLGPLLLECGYLRVP RLLGDGAENAVWAARRGYTDYGGAQQFWRPLRQRASLLTGVTTLTWDPHYCVVAGTRDAAGLTMQAAFDWRFLLPFKVTD SNNNQHHGALDALGRLVSRRFWGTEGGLPAGYSAPEDAPFTAPSSVDEALALTPGIPVAECFVIVPDSWMPNLSESQVSE LDGEDASLWRDLRIAGVVSEDNRVCALARRRWKQQGTALDSWLAQAQRVPPHTLTLTTDRYDTDLAQQLRQQVTFSDGFG RVLQSSVRHEAGDAWQLAEDGSLVTGATGVPITAYSDFRWAVTGRVEYDNKGQVMRVYQPYFLNDWRYVRDDHARADAFA DRQDYDPMGRLIRVVTAKGYLRRTQYYPWFVVKEDENDTEALEQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcdB1 | AAL18487.1 | TcdB1 | Virulence | tcd island | Protein | 0.0 | 59 |
| tcdB2 | AAO17202.1 | TcdB2 | Virulence | tcd island | Protein | 0.0 | 57 |
| tcaC'(2) | CAI77376.1 | putative insecticidal toxin complex protein | Not tested | tc-PAIYe | Protein | 0.0 | 47 |
