Gene Information

Name : BURPS1710b_A1701 (BURPS1710b_A1701)
Accession : YP_336858.1
Strain :
Genome accession: NC_007435
Putative virulence/resistance : Virulence
Product : SciB protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 2077675 - 2078760 bp
Length : 1086 bp
Strand : +
Note : identified by match to protein family HMM PF06996

DNA sequence :
ATGGCGCGCGACATGACGCAGGCGGCCGTTGCCGACACGGCGCTGTCGCCGCAAGCGCTCGCGCGGCTGCGCGCCGAACC
GTGGCGCTATGGGTTCCTCGCGCTGCTGCGCCGCATCGGCGCGGACGCGCGCATCGATCCGATCGGCAAGGCGAGGCGCC
CGCAGGCGGAGCCGTTTCGCCTCGGCCAGCAGCCGAGCCTCGCGTTCGCGCCGCGCGAGATCGCCAGCGTCGGCGACGCG
AACGGGCGGCTCAAGGTGCGGCTGTTCGGGCTCGGGATGCTGGGGCCGAACGGGCCGCTGCCGATCCACGTGACGGAGAT
CGCGCGCGATCGCGAGGAGAGCCGGCGCGATCCGACGCTCGGCAATTTTCTCGATATCTTCCATCATCGCTATCTGACGC
TGCTGTATCGCGCGTGGGCGTCGGCGCAGGCGGCGGCCGGCCTCGATCGTCCGGATGACGAACGGTTTTCGTTCTACGTC
GCGAGCCTCGCCGGCCAGGATCTCGACGAGGTCGGCGCGCGGCCGCTGCCCGCGCACGCGCGGCTGTCCGCCTCGCCGCA
TCTGGTGCGCGAGGCGCGCAACGCGGACGGCCTGCGAATGACGCTCGAACGTTACTTCGGCGTGCCGGTGACGCTGGAGG
AAAACGTATTTCACTGGATCGCCGTCGATCCGCTCGAGCACAGCCGGCTCGGCCGGCCCGGCGACGCATCGACGATGGCT
GCGGGCGCGCTGCTCGGCGAGCTGGTGCCGGATCGGCAGCACAAGTTCCGGCTCGTGTTCGGGCCGCTCGACATCGACGC
CTATCTGCGCTTCACGCCGCGGGGCGAGGATCTGCCGCGGCTCGTCGAATGGGTGCGGGCGTTCGTCGGCTACGAGTTCG
AGTGGGAGCTCGAGTTGCGGATCAAGCCGAACGGCGCGCCGCCCGCCGTGATGGGCGGCCCGCATCAACTCGGCTGGTCG
GGCTGGCTCGGCCGCTCGCCGTCCGGCGAGCCGGTGACGGGCATGCGTTTCGAACCCGAGCACTATGCGCACGGGTTCGC
GCGCGGCACGGCTCGCGACACGCGCGGCATGCGAGGTGAACGATGA

Protein sequence :
MARDMTQAAVADTALSPQALARLRAEPWRYGFLALLRRIGADARIDPIGKARRPQAEPFRLGQQPSLAFAPREIASVGDA
NGRLKVRLFGLGMLGPNGPLPIHVTEIARDREESRRDPTLGNFLDIFHHRYLTLLYRAWASAQAAAGLDRPDDERFSFYV
ASLAGQDLDEVGARPLPAHARLSASPHLVREARNADGLRMTLERYFGVPVTLEENVFHWIAVDPLEHSRLGRPGDASTMA
AGALLGELVPDRQHKFRLVFGPLDIDAYLRFTPRGEDLPRLVEWVRAFVGYEFEWELELRIKPNGAPPAVMGGPHQLGWS
GWLGRSPSGEPVTGMRFEPEHYAHGFARGTARDTRGMRGER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0288 NP_454870.1 hypothetical protein Not tested SPI-6 Protein 9e-82 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BURPS1710b_A1701 YP_336858.1 SciB protein VFG2075 Protein 1e-45 43