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Name : secD (PSHAa0321) Accession : YP_338863.1 Strain : Genome accession: NC_007481 Putative virulence/resistance : Unknown Product : preprotein translocase auxillary membrane component Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 336231 - 338090 bp Length : 1860 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter DNA sequence : GTGTTAAACAAGTTTCCACTTTGGAAGTATTTACTTGTTTTAGCTGTGGTAGCCGTTGGCCTTTTATACGCCTCTCCAAA CTTGTATGGTCGCGATCCGGCTATACAAGTTTCTGGCGCTAAAGGTGCTGATGTTGATCTCAGTGTAATAGACAAAGTAA ACGCAACCCTCAAAAAACATAACGTTAGTGTTAAATCAACGAAACTCGAAGATGGGCAAATACTCGTTCGCTTTAGAAAC GTTGAAGAGCAGCTAAAAGCGCAAGATTTATTGCGTAACTCTCTTAGCGATGATTACATTTCTGCTATAAACATGGCTCC AGCGCAACCAGCTTGGTTAAAAGCGGTTGGCGGCAACCCAATGAAGCTAGGCCTAGACTTAAGTGGTGGTGTGCATTTCA CCATGGAAATTGACATGGCGACAGCCGTTGATAACCAGCTTGAGCAAATGGAAGAAGACTTTCGTAGCGACCTACGTGAA GAAAAACTTCGTTATCGCAGTGTTCGCCGTGTAGCGGGCTCTGATCGTATGCGTGTAGAAATGCGCAGCGAAGAAGATAA AGACGCTGCAGAGCGCTTCTTAAAAACGCAGTATCCATTAAATGTATACATAGATGATAGCAGTAACGATAACGCATTTT ATGCGACTATGAGTGAGCAAAAACTCAAAGAAATTCGTGATTACGCTATCAAGCAAAACGAAACGATTATTCGTAACCGT ATTAACCAAATTGGTGTTGCTGAGCCAAACGTACAGCGCCAAGGTGCTGAGCGAATTATTGTGCAACTACCCGGCATTCA AGATACTGCTCGTGCTAAAGAGATTTTAGGCGCAACGGCCACACTTGAGTTTCGCGAAGTAGAAGAAAACGCCGATATTA GCGCTGCTGCTCAAGGTCGTATCCCACCGGGTACTGAAATGATCATGAGCCGTGACGGTTACCCTGTGGTACTTAAAAAA CGTATTATTCTTGAAGGTAGCCATATTACTGGCGCGCAATCAGGTAGCGATGAATACCAACGCCCGCAAGTAAGTATTAC GCTAGATAGCAAAGGTGGGGCAAAAATGAATGCCTTTACCAAGCGAGCTATTGGTAAGCGCATGGCCACGGTATTTATTG AATACAAACCATCAGGTAAAAAAGATGCCGACGGTAAAGCGCTTCCGCCTATTAAGGTTGAAGAAGTTATTAACGTAGCA ACTATTCAAGCACGCCTTGATCGCTCGTTCCGTATTACCGGTATTGATAACCCAGCAGAAGCACATAACTTAAGCTTATT ACTACGTGCTGGTGCACTTGTAGCGCCAATTCAAATAGTTGAAGAGCGCACCGTAGGGCCAAGCTTAGGGCAAGAAAACA TTGAAGCAGGTATGACCGCGGTAGCACTTGGTTTTGCATTCGTACTTGCATTTATGCTTATTTACTACAAAGGCTTTGGC ATGGTTGCTAACCTTGCGCTTGCTGCTAACTTAGTACTTATTATTGGTGTTATGTCGTTAATTCCAGGCGCAACGCTTAC TTTGCCTGGTATTGCCGGTATTGTACTAACTGTAGGTATGGCGGTTGATGCCAACGTACTTATTTTTGAACGTATTCGTG AAGAGCTGGCCGATGGCCGTAGCCCTCAACAAGCCGTTCATTTTGGTTATGACAGTGCATTTAGCACTATTTTCGATGCC AATATTACCACCTTAATTGCTGCCGTTATTTTGTTTGCTGTGGGCACTGGCCCAATTGCAGGCTTTGCGGTTACGTTAGC AATTGGTATTTTAACGTCAATGTTTACAGCTATTGTTGGTACACGTGCGATTATCAACTTATTTATCGGCGGTAAACGTG TTGATAAACTTTCAATTTAA Protein sequence : MLNKFPLWKYLLVLAVVAVGLLYASPNLYGRDPAIQVSGAKGADVDLSVIDKVNATLKKHNVSVKSTKLEDGQILVRFRN VEEQLKAQDLLRNSLSDDYISAINMAPAQPAWLKAVGGNPMKLGLDLSGGVHFTMEIDMATAVDNQLEQMEEDFRSDLRE EKLRYRSVRRVAGSDRMRVEMRSEEDKDAAERFLKTQYPLNVYIDDSSNDNAFYATMSEQKLKEIRDYAIKQNETIIRNR INQIGVAEPNVQRQGAERIIVQLPGIQDTARAKEILGATATLEFREVEENADISAAAQGRIPPGTEMIMSRDGYPVVLKK RIILEGSHITGAQSGSDEYQRPQVSITLDSKGGAKMNAFTKRAIGKRMATVFIEYKPSGKKDADGKALPPIKVEEVINVA TIQARLDRSFRITGIDNPAEAHNLSLLLRAGALVAPIQIVEERTVGPSLGQENIEAGMTAVALGFAFVLAFMLIYYKGFG MVANLALAANLVLIIGVMSLIPGATLTLPGIAGIVLTVGMAVDANVLIFERIREELADGRSPQQAVHFGYDSAFSTIFDA NITTLIAAVILFAVGTGPIAGFAVTLAIGILTSMFTAIVGTRAIINLFIGGKRVDKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-111 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-110 | 47 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 9e-111 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 9e-111 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 9e-111 | 47 |
