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Name : clpB (PSHAa0935) Accession : YP_339457.1 Strain : Genome accession: NC_007481 Putative virulence/resistance : Unknown Product : ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 962980 - 965556 bp Length : 2577 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2066329; Product type f : factor DNA sequence : ATGCGTTTAGATAGATTTACCAGTAAATTTCAGTCTGCGCTTTCTGATGCGCAATCTTTAGCCCTTGGCCGCGATCATCA ATTTATTGAGCCGGTACACTTAATGTATGCTTTGTTAAAGCAAAGCGGCTCAAGCGTGCGCGCGTTATTAGCACAAGCAG GTGTTAGTGCTGACGAGCTTAATACTAAGCTTTCCCAAGAAATAGAAAAACTATTTAAAGTGGAAGGCGTAGGCGGCGAT GTGCAGCTATCGAACAACACTATATCCTTGATCAACTTATGCGATAAGTATGCGCAAAAGCGTAAAGATAAATATATTTC TAGCGAACTGTTTGTATTAGCTGCTTGCGACGATAAAGGCCCGCTGGGTAATATTTTTAAAACCTTAAATATCACCTCCG ACAAAATAGAAACGGCCATTAATGCAGTGCGTGGTGGGCAAAAGGTTGATGATCCAAATGCCGAAGAAACACGCCAAGCA CTTGAAAAATACACCATAGATTTAACCGAACGTGCAGAGCAAGGTAAGCTTGATCCGGTTATTGGTCGAGATGATGAAAT TCGCCGAACAATTCAAGTTTTACAACGCCGAACTAAAAACAACCCAGTATTAATAGGTGAACCCGGTGTAGGTAAAACTG CGATTGCCGAAGGTTTAGCACAGCGTATTATTAATGGTGAAGTACCAGAGGGATTAAAAAACAAGCGGGTACTTTCGCTT GATTTAGGCGCGCTGGTGGCCGGTGCTAAATACCGCGGCGAATTTGAAGAGCGATTAAAATCAGTATTAAATGAACTGGC TAAAGAAGAAGGTCAAGTGATTTTATTTATTGATGAAATACACACAATTGTAGGCGCAGGTAAAAGTGATGGCGCAATGG ATGCAGGCAATATGCTAAAACCGGCACTTGCCCGTGGCGAATTACATTGCGTAGGTGCCACCACTCTTGATGAATATCGT AAATACATTGAAAAAGACGCCGCCCTTGAGCGTCGCTTTCAAAAGGTATTGGTAGAGGAGCCTTCGGTTGAGGATACTAT TGCTATATTACGTGGCCTAAAAGAGCGCTACGAGCTGCATCACTCTGTTGAAATTACCGATCCTGCTATCGTTGCTGCTG CGCAATTATCGCATCGTTATATTAGTGACCGTCAATTACCCGATAAAGCAATTGACCTAATAGATGAAGCGGGCTCTTCT ATTCGTTTACAAATAGATTCAAAACCAGAGTCATTAGATAAGTTAGAACGCCGTATTATTCAATTAAAACTTGAAGATAA CGCACTCGCCAAAGAAAAAGACGAAGCAAGTTTAAAACGCCGTACTGAAATGCAAGAGCTGATCACCGAGCTTGAAGGAG AGTACAATGAGCTTGATGAGATATGGACTGCCGAAAAAGCATCTTTACAAGGTACTCAAGTTATTAAAGCTGAGCTAGAA CAAGCACGACTTGATTTAGATGTAGCTCGAAGAGCCAGCGATTTACAGCGTATGTCGGAGCTACAATATGGCCGCATACC AGAGCTTGAGCGTAAACTTGATTTAGCATCGCAAGCAGAAATGCAAGAAATGACCTTGCTAAAAAACCAAGTGGGCGAAG ATGAAATAGCCGAAATACTCTCTCGTTGGACCGGTATTCCAGTATCGCGGATGCTACAAGGTGAGCGAGAAAAACTATTG CAGATGGAAGAAAAGCTACATGAAAAAGTAATCGGACAAGATGAAGCCGTTGTAGCGGTAGCTAATGCTATTCGCCGCTC ACGTGCAGGGCTTGCCGATCCTAATCGCCCGATTGGCTCGTTTTTGTTTTTAGGCCCAACCGGGGTCGGTAAAACAGAAT TAACCAAAGCACTCGCCGGCTATATGTTCGACACCGAAAGTGCCATGGTGCGTATTGATATGTCTGAGTTTATGGAAAAA CATTCAGTAGCACGTTTAGTTGGTGCGCCTCCTGGGTATGTTGGCTACGAAGAGGGCGGGTATTTAACCGAAGCCGTGCG TCGTAAACCTTACTCAGTTATTTTATTGGACGAAATAGAAAAAGCACACCCAGATGTGTTTAATATTTTGCTACAGGTTT TAGATGATGGACGTTTAACCGACGGTCAAGGACGCACGGTTGATTTTAAAAATACCGTTATCATCATGACCTCAAACTTA GGCTCAGATATAATTCAAGAGCAAGCGGGTAATAACGATTACGTTACTTTGAAAGAAAAAGTAATGAATGTATTAATCAA TGAGTTTAGACCTGAGTTTATTAACCGTATTGATGAAACCGTTGTTTTCCACCCACTGGCTAACGAGCACATTAAAGAGA TTGCTGATATTCAGTTAAGTAAATTACGTGAGCGTTTAACGCAAATGGGTTATTTACTCGAGATAAGCGACGCTGCTTTA GAGCGTATTGCCGCAAGTGGTTTTGATCCGGTTTATGGTGCGCGTCCGTTAAAACGAGCTATTCAACAAACGATTGAAAA TCCATTAGCACAAAAATTACTCAATGGTGATTATATGCCAGGCAGTGTTGTTGTAATTGATGCAAATGACGACGGTTTAG TGTTTTCAAGCCGTTAA Protein sequence : MRLDRFTSKFQSALSDAQSLALGRDHQFIEPVHLMYALLKQSGSSVRALLAQAGVSADELNTKLSQEIEKLFKVEGVGGD VQLSNNTISLINLCDKYAQKRKDKYISSELFVLAACDDKGPLGNIFKTLNITSDKIETAINAVRGGQKVDDPNAEETRQA LEKYTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSL DLGALVAGAKYRGEFEERLKSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEYR KYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLIDEAGSS IRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASLKRRTEMQELITELEGEYNELDEIWTAEKASLQGTQVIKAELE QARLDLDVARRASDLQRMSELQYGRIPELERKLDLASQAEMQEMTLLKNQVGEDEIAEILSRWTGIPVSRMLQGEREKLL QMEEKLHEKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELTKALAGYMFDTESAMVRIDMSEFMEK HSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNL GSDIIQEQAGNNDYVTLKEKVMNVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLSKLRERLTQMGYLLEISDAAL ERIAASGFDPVYGARPLKRAIQQTIENPLAQKLLNGDYMPGSVVVIDANDDGLVFSSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-107 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 8e-106 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 6e-106 | 41 |
