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Name : secF (Noc_2349) Accession : YP_344337.1 Strain : Nitrosococcus oceani ATCC 19707 Genome accession: NC_007484 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 2693067 - 2694005 bp Length : 939 bp Strand : - Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGAAACTACTTAAAAAAAATCTCCGTATTGATTTCATGGGCAAGCGCCGCCTTGCCTTTGCATTTTCCCTGGCGTTGCT TCTTATTTCTATAAGCTCGCTGATTTTTCAGGGACTGAGTTTTGGCATTGATTTCACCGGCGGAACTTTATTGGAAGTGG GTTATGAACAGCCGGTAGAACTATCGGATGTGCGCCAGAATTTGGAAGAAGCAGGGTTCGGTGGTGCCATTGTGCAGCAT TTTGGCACCACGCGGGATGTATTGATTCGCTTGGCGCCGGAAGCTGAACGCAGCAGTGCCGAGGTTAGCGAGGAAATATT GGCCACCTTGCAGAAAAGCCGTGATAATCCGGCCACCATGCGGCGGGTGGAGTTCGTGGGTCCTAAGGTGGGGAAAGATC TCACCGAGCAGGGAGGACTCGCGGTACTCTATGCGCTAATTGGCATTTTGATTTATGTTGCCTTGCGCTTCGAGTACCGG CTTGCCATTGGTTCGGTGGTTGCCTTGATACACGATGTGATTATCGTGCTGGGTCTGTTCTCCCTCCTGCATTTTGAGTT TGATCTTACCGTACTGGCAGCGATTCTTGCGGTCATTGGTTATTCCCTTAACGATACTATCGTGGTGTCGGATCGGATCC GGGAAAATTTCCGCAAAATACGGAAGGGGACAGCAAAGCAAATAATTAATACCTCTATAAACCAGACTTTATCCCGTACC ATAATGACCTCTTTGACCACCTTGCTCGTTCTCTTTGCTCTATTTTTATTTGGCGGCGAAACAATCCATAGTTTTTCCAC CGCTCTTATTGCGGGCATTGTGGTAGGCACTTATTCTTCAATTTATGTTGCCACTCCCATGGCTCTGGCCTTAGGAATTA GTAAAGCGGATCTGGCTTCTACTCCCAAGGAAGGAAAAAAGCTGGATGAGCGGCCTTAA Protein sequence : MKLLKKNLRIDFMGKRRLAFAFSLALLLISISSLIFQGLSFGIDFTGGTLLEVGYEQPVELSDVRQNLEEAGFGGAIVQH FGTTRDVLIRLAPEAERSSAEVSEEILATLQKSRDNPATMRRVEFVGPKVGKDLTEQGGLAVLYALIGILIYVALRFEYR LAIGSVVALIHDVIIVLGLFSLLHFEFDLTVLAAILAVIGYSLNDTIVVSDRIRENFRKIRKGTAKQIINTSINQTLSRT IMTSLTTLLVLFALFLFGGETIHSFSTALIAGIVVGTYSSIYVATPMALALGISKADLASTPKEGKKLDERP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 9e-58 | 50 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 8e-58 | 50 |
