Gene Information

Name : Noc_0946 (Noc_0946)
Accession : YP_342987.1
Strain : Nitrosococcus oceani ATCC 19707
Genome accession: NC_007484
Putative virulence/resistance : Virulence
Product : cytochrome c-type biogenesis protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 1044162 - 1044914 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence :
ATGCATTATCTACCATTCCACCATCGATACCAACATTTAGCCTCTCCAAAATATTTTTATATCTGGTCTGGCCGCCTACT
TCCATGGCTAGCGAGCATTACTGCAATCTTGATGATCGTAGGACTTTATTGGGGGTTAGTCGTCGCCCCGGCGGATTACC
AACAAGGCGACAGCTACCGAATTATATTTATCCATGTCCCCAGCGCCTGGATGTCCTTGTTCATCTACGTCGTCATGGCT
TCGGCAGGTGCTATTGCCCTAATCTGGCGAGTCAAAGTTGCAGAGGTCATTGGCAGTGCCAGCGCTCCATTGGGCGCCTC
TTTTACCTTATTAGCGTTAATCACGGGTTCGCTTTGGGGGAAACCCATGTGGGGAACCTGGTGGGTATGGGATGCACGTC
TGACCTCAGAGCTAATTCTGTTATTCCTGTATCTAGGTTACATGGCCTTGCAGTCGGCTATCGAAGACCCCCGGCAAGCT
GCCCGGGCAGCGGCTATCCTTGCCTTGGTGGGCGTAGTCGACTTACCCATTATTCACTATTCAGTAGAGTGGTGGAATAC
CTTGCATCAAGGCCCTACAGTCACTAAATTTGACGCTCCGTCTATTCACTGGAGCATGCTAATTCCATTGCTCATTATGG
CAACGGCCTTCACAACTTACTATATAACTTTACTCCTGCTCCGGACCCGCTCAGAACTCCTAGAACGAGAGCGTAATAAT
GGTTGGGTCAAACAGGTGCTAAGTTCTTCTTAA

Protein sequence :
MHYLPFHHRYQHLASPKYFYIWSGRLLPWLASITAILMIVGLYWGLVVAPADYQQGDSYRIIFIHVPSAWMSLFIYVVMA
SAGAIALIWRVKVAEVIGSASAPLGASFTLLALITGSLWGKPMWGTWWVWDARLTSELILLFLYLGYMALQSAIEDPRQA
ARAAAILALVGVVDLPIIHYSVEWWNTLHQGPTVTKFDAPSIHWSMLIPLLIMATAFTTYYITLLLLRTRSELLERERNN
GWVKQVLSSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 4e-45 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noc_0946 YP_342987.1 cytochrome c-type biogenesis protein CcmC VFG1856 Protein 2e-40 59