Gene Information

Name : Pfl01_0123 (Pfl01_0123)
Accession : YP_345856.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : sigma-24 (FecI)
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 131823 - 132371 bp
Length : 549 bp
Strand : -
Note : -

DNA sequence :
ATGACAATGCGACTAATTATCATTTGTGACGTTCGGGCTGTCGCGTTCATGTCCTCATCTGAGTTTGCAGTACAGGCGCT
TTACAGTAGTCATCACGGCTGGCTCAACGGCTGGTTGCGCGCGCGACTGGGCAATGCCGCCGATGCGGCGGATCTGGCTC
AGGACACGTTCGTGCGTTTGCTGCAACGCACCGAGCGTCTGGAACTCAAGGCACCTCGCGCATTCTTGCGCACGGTTGCC
CGGGGTTTGGTGATAGATCATTGGCGCCGTGAAGAAATTGAGCGCGCCTATCTGGAAACCATCGCCCATTTGCCTGAAGC
CGAAACCCCAAGTGGCGAATCCCGCGCATTGGTGATCGAACTGCTCGAGGGCATTGCCCGCATGCTTGAAGGCCTGAAGC
CGAAAGTGCGTCAGGCATTTCTGCTGGCGCAGTGCGAAGGTTTGACCCACAAGCAGATCGCCGAGCAGATGGGACTGTCT
CTGCGCTCGGTAGAACGCTACGTCGCCGACGCCCTGTTTCACTGCTACGTGCTGCGGTACGAAAACTGA

Protein sequence :
MTMRLIIICDVRAVAFMSSSEFAVQALYSSHHGWLNGWLRARLGNAADAADLAQDTFVRLLQRTERLELKAPRAFLRTVA
RGLVIDHWRREEIERAYLETIAHLPEAETPSGESRALVIELLEGIARMLEGLKPKVRQAFLLAQCEGLTHKQIAEQMGLS
LRSVERYVADALFHCYVLRYEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 5e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_0123 YP_345856.1 sigma-24 (FecI) VFG1049 Protein 2e-33 44