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Name : rnhA (Pfl01_2186) Accession : YP_347918.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 2470094 - 2470555 bp Length : 462 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAGCGAAAGCGTCGATAGCGTAGAACTGTTCACTGACGGCGCCTGTAAAGGCAACCCCGGCCCCGGCGGCTGGGGCGC CTTGCTGGTGTGCAAGGGTGTTGAAAAGGAACTGTGGGGCGGCGAAGCCAACACCACCAACAACCGCATGGAACTGCTCG GCGCGATTCGCGGCCTGGAAGCCCTCAAGCGTCCGTGCGAAGTGCTGCTGGTGACTGACTCGCAATACGTGATGAAGGGC ATCAACGAATGGATGGCCAACTGGAAGAAACGCGGCTGGAAAACCGCTGCCAAGGAGCCGGTGAAAAACGCCGATCTGTG GAAAGCGCTCGACGAGCAGGTCAACCGCCACAAAGTCACCTGGAAATGGGTCCGCGGCCACATCGGCCACCACGGCAACG AACGCGCCGACCAGTTGGCCAACCGTGGGGTGGATGAAGTTCGCGGTTACAAGCAGAGCTGA Protein sequence : MSESVDSVELFTDGACKGNPGPGGWGALLVCKGVEKELWGGEANTTNNRMELLGAIRGLEALKRPCEVLLVTDSQYVMKG INEWMANWKKRGWKTAAKEPVKNADLWKALDEQVNRHKVTWKWVRGHIGHHGNERADQLANRGVDEVRGYKQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 4e-37 | 58 |
