Gene Information

Name : Pfl01_2718 (Pfl01_2718)
Accession : YP_348449.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : transketolase subunit B
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : 2.2.1.1
Position : 3134810 - 3135832 bp
Length : 1023 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAACGCCGCCAACACACCGACCTCGACTGGTGAACCGATCAAGAAGCGCCTGACCACCTCGGCGATGATTGCCTC
GATTGCCTCTGAAGGCCAAGCCACCCGCTCAGCACCTTTTGGCCATGCATTGGCTGCACTGGCGGATCAGCGTCCGGACA
TCGTCGGCCTCTCCGCTGACCTGTCCAAGTACACCGACCTGCACATTTTCGCCAAGGCCCACCCGGATCGTTTCTATCAG
ATGGGCATGGCCGAACAGTTGCTCATGAGTGCGGCCGCAGGCATGGCCCGCGAAGGATTCGTGCCGTTCGCGACCACGTA
TGCGGTGTTCGCCTCGCGTCGCGCCTATGACTTCATCTGCATGGCCATTGCCGAGGAAAACCTCAACGTCAAAATCGTTT
GCGGATTGCCCGGCCTCACCACCGGTTACGGCCCCAGCCACCAGGCCACCGATGACCTGGCGATCTTCCGGGCGATGCCC
AACCTGATGATCGTCGACCCTTGTGATGCCTTGGAAATCGAACAGGCCGTGCCCGCCATTGCCGCGCATCAGGGGCCGGT
CTACATGCGGCTGCTGCGCGGCAACGTGCCGCTGGTGCTGGATGAGTACGGGTATCAATTCGAGATCGGCAAGGCCAAGA
CCCTGCGCACCGGCAACGATGTCCTGATCATCTCGACCGGTTTGATGACCATGCGCGCATTGGAGGCCGCCAAGGCGCTG
CAGACCGATGGCGTCGATGTCGCCGTGCTGCATGTGCCGACGATCAAACCGCTGGATGAACAGACCATTCTCGCCGAGGC
CCGCAAGTCTGGCCGGCTGGTGGTTACCGCAGAAAACAGCTCGATTATTGGCGGGCTCGGTGAAGCGGTTGCCGGGGTAC
TGCTGCGCAACGGAGTGACGCCGACGTTCAGGCAGATTGCATTGCCCGACGCCTTCCTCGACGCCGGTGCATTGCCGACA
CTGCATGATCGCTATGGCATTTCCACCGACGCCGTCTGCGCGCAAATCAAATCCTGGCTTTGA

Protein sequence :
MSNAANTPTSTGEPIKKRLTTSAMIASIASEGQATRSAPFGHALAALADQRPDIVGLSADLSKYTDLHIFAKAHPDRFYQ
MGMAEQLLMSAAAGMAREGFVPFATTYAVFASRRAYDFICMAIAEENLNVKIVCGLPGLTTGYGPSHQATDDLAIFRAMP
NLMIVDPCDALEIEQAVPAIAAHQGPVYMRLLRGNVPLVLDEYGYQFEIGKAKTLRTGNDVLIISTGLMTMRALEAAKAL
QTDGVDVAVLHVPTIKPLDEQTILAEARKSGRLVVTAENSSIIGGLGEAVAGVLLRNGVTPTFRQIALPDAFLDAGALPT
LHDRYGISTDAVCAQIKSWL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 6e-143 97
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 7e-111 97
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 1e-122 97
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 3e-144 94