Gene Information

Name : Pfl01_2959 (Pfl01_2959)
Accession : YP_348690.2
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : cytochrome c-type biogenesis protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 3396560 - 3397315 bp
Length : 756 bp
Strand : -
Note : -

DNA sequence :
ATGAACTGGAACTGGTTTCATAAGCTCGGCTCACCCAAGTGGTTCTACGGCATCAGCGGCAAACTGCTGCCCTGGCTGAG
CATCGCCGCCGTGCTGCTGATTGGCAGCGGCGTGGTCTGGGGCCTGGCTTTCGCGCCACCGGATTACCAGCAGGGCAACA
GTTTCCGCATCATCTACATCCACGTTCCCACGGCGGTGCTGGCCCAGTCCATCTACGTGATGCTGGCGGTGTGCGGTGTG
GTGGGGCTGGTCTGGAAGATGAAGCTGGCTGACGTGGCCCTGCAGTGCGCCGCCCCCATCGGCGCCTGGATGACCGCCGT
GGCGCTGGTCACCGGCGCCATATGGGGCAGGCCGACCTGGGGTTCATGGTGGGTCTGGGATGCCCGACTGACGTCGATGC
TGATCCTGCTGTTCCTGTACTTCGGTCTCATTGCGCTGGGCAACGCCATCAGCAATCGTGACAGCGCCGCCAAGGCATGC
GCGGTGTTGGCGATTGTCGGGGTGATCAACATCCCGATCATCAAGTACTCGGTGGAGTGGTGGAACACCCTGCACCAGGG
CGCGACGTTCACCCTCACCGAAAAGCCGGCGATGCCCGTGGAAATGTGGCTGCCGCTGTTGCTCACCGTATTGGGCTTCT
ACTGTTTCTTCGGCGCGGTGCTGTTGCTGCGCATGCGCCTCGAAGTGCTCAAGCGCGAAGCCCGCGCCAGTTGGATGAAG
GCCGAATTACAGAACAGCCTGGAGGCCGCTCGATGA

Protein sequence :
MNWNWFHKLGSPKWFYGISGKLLPWLSIAAVLLIGSGVVWGLAFAPPDYQQGNSFRIIYIHVPTAVLAQSIYVMLAVCGV
VGLVWKMKLADVALQCAAPIGAWMTAVALVTGAIWGRPTWGSWWVWDARLTSMLILLFLYFGLIALGNAISNRDSAAKAC
AVLAIVGVINIPIIKYSVEWWNTLHQGATFTLTEKPAMPVEMWLPLLLTVLGFYCFFGAVLLLRMRLEVLKREARASWMK
AELQNSLEAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-44 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_2959 YP_348690.2 cytochrome c-type biogenesis protein CcmC VFG1856 Protein 2e-50 48