Gene Information

Name : Pfl01_3796 (Pfl01_3796)
Accession : YP_349525.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : sigma-24 (FecI)
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 4297800 - 4298390 bp
Length : 591 bp
Strand : +
Note : -

DNA sequence : 
ATGCGATCAATTCTTAATTGCACCCTAATCGCACTCTCGATTGCATCTCTGGCAACGGACGCCCGAAACGAGTATCTGCC
CTCCATGTCGTCCCTCGATCAGCCGTTGAATCAGCAAGTCCAGACGCTCTACAGCGAACACCACGGGTGGCTGCAGGGCT
GGCTTCAACGCAAGTTGGGCAATCGCTGCGATGCGGCCGATCTGGCGCACGATACCTTTTTGCGCCTGCTCACCCGGCAG
GTGATCAAGCCCTTGGGCAACGAGCCCCGGGCGCTGCTGACGCACATTGCCAAAGGTCTGGTGATCGACCGCTGGCGGCG
ACAGGACCTGGAGCGCGCGTACCTGGAAACCATCGCGCACCTGCCCGCCGCCGAAGTGCCGTCGCCGGAAACCCGCTACC
TGATTCTCGAAACCCTGTGGCGCATCGAAGCGCTGCTGCGCGAACTGCCGGAACAGACCCGCGAGACCTTCCTGCTGTCG
CAGATCGAAGGCCTGACCTACGCGCAGATCGCCACGCGCCTGAATGTTTCGCTGATCACCGTCAAACGCCACATGCGTGC
TGCGTTCATTGCCTGCCTGAGTGTCGCCTGA

Protein sequence : 
MRSILNCTLIALSIASLATDARNEYLPSMSSLDQPLNQQVQTLYSEHHGWLQGWLQRKLGNRCDAADLAHDTFLRLLTRQ
VIKPLGNEPRALLTHIAKGLVIDRWRRQDLERAYLETIAHLPAAEVPSPETRYLILETLWRIEALLRELPEQTRETFLLS
QIEGLTYAQIATRLNVSLITVKRHMRAAFIACLSVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-31 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_3796 YP_349525.1 sigma-24 (FecI) VFG1049 Protein 4e-32 47