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Name : Pfl01_4834 (Pfl01_4834) Accession : YP_350562.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : chaperone clpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 5451827 - 5454391 bp Length : 2565 bp Strand : - Note : - DNA sequence : ATGCGTATAGACCGTTTAACCAGCAAATTGCAGTTGGCGTTGTCCGATGCCCAATCCCTGGCTGTTGGCCACGATCATCC TGCCATCGAGCCGGCGCATTTGATGCAGGCCATGCTTGAACAGCAGGGTGGTTCGATCAAACCCCTGTTGATGCAGGTGG GCTTCGACGTCAACAGCTTGCGTAAAGAGCTGACCAAAGAGCTCGATCAATTACCGAAAATCCAGAATCCGACCGGCGAC GTCAACATGTCGCAGGATCTGGCGCGTCTGCTCAACCAGGCCGATCGTCTGGCCCAGCAGAAGGGCGATCAGTTCATTTC CAGCGAGCTGGTGCTGCTCGCCGCGATGGACGAGAACAGCAAGCTCGGGAAGTTGCTGCTCGGCCAGGGCGTGAGCAAAA AGGCTCTGGAAAATGCAATCAACAACCTGCGCGGTGGCGAGGCGGTCAACGACGCCAACCACGAAGAGTCGCGTCAGGCA CTGGATAAGTACACCGTCGACCTGACCAAACGCGCCGAAGAAGGCAAGCTTGACCCGGTGATCGGCCGTGACGACGAGAT CCGTCGCACCATTCAGGTGCTGCAACGCCGTACCAAGAACAACCCGGTGCTGATCGGCGAGCCTGGCGTGGGTAAAACCG CGATTGCCGAAGGTCTGGCCCAGCGCATCATCAATGGTGAAGTGCCGGACGGCCTGCGCGGCAAGCGTCTGCTGTCCCTC GATATGGGGGCGCTGATTGCCGGTGCCAAGTATCGCGGCGAGTTTGAAGAGCGCCTGAAAGCGCTGCTCAACGAGCTGTC GAAGCAGGAAGGGCAGATCATTCTGTTCATCGACGAACTGCACACCATGGTCGGCGCCGGCAAGGGCGAAGGCTCGATGG ACGCCGGCAACATGCTTAAACCGGCCCTGGCCCGTGGTGAGCTGCATTGCGTCGGCGCGACCACGCTCAACGAGTACCGC CAATATATAGAGAAGGACGCGGCCCTCGAGCGACGCTTCCAGAAAGTGCTGGTGGACGAGCCGAGCGAAGAGGACACCAT CGCGATCCTGCGTGGCCTCAAGGAGCGTTACGAGGTTCACCACAAGGTGGCGATCACCGACGGCGCGATCATCGCGGCGG CCAAGCTCAGCCATCGCTACATCACTGACCGGCAGCTGCCGGACAAGGCGATCGACCTGATCGACGAGGCGGCCAGCCGC ATCCGCATGGAGATCGACTCCAAGCCGGAAGTGCTGGATCGTCTTGAGCGGCGCCTGATTCAACTGAAGGTGGAATCTCA GGCACTGAAGAAAGAAAGTGACGACGCGGCGAAGAAACGTCTGGAGAAACTCCAGGAAGAAATCGATCGCCACGAGCGTG AGTACTCCGATCTGGAAGAAATCTGGAACTCGGAAAAAGCCGAGGTGCAGGGCTCTGCGCAGATTCAGCAGAAGATCGAA CAGTCCCGTCAGGAGCTGGAAGCCGCGCGCCGTAAAGGCGACCTGAACCGCATGGCCGAGTTGCAGTATGGGGTGATCCC GGATCTGGAACGCAGCCTGCAAATGGTCGACCAGCACGGCAAGAGCGAAAACCAGTTGCTGCGCAGCAAGGTGACCGAAG AGGAAATCGCCGAAGTCGTTTCGAAGTGGACCGGTATTCCGGTGTCGAAAATGCTCGAAGGCGAACGCGACAAGCTGATG AAGATGGAAAGCCTGTTGCATCAACGCGTGATCGGCCAGGACGAAGCGGTGGTGGCAGTAGCCAACGCGGTGCGGCGTTC CCGTGCCGGGTTGTCCGACCCGAACCGCCCGAGCGGCTCGTTCATGTTCCTCGGCCCGACCGGTGTCGGTAAAACCGAGC TGTGCAAGGCGCTGGCCGAATTCCTCTTCGATACGGAAGAGGCGATGGTGCGAATCGACATGTCCGAGTTCATGGAGAAA CATTCCGTGGCACGGTTGATCGGGGCACCACCGGGCTACGTCGGCTACGAAGAGGGTGGTTACCTGACCGAAGCGGTACG GCGCAAGCCTTACTCGGTGATCCTGCTGGACGAAGTCGAGAAGGCGCATCCGGACGTGTTCAACATCCTGCTGCAAGTGC TGGAGGACGGACGTCTGACCGACAGCCATGGCCGCACGGTGGACTTCCGCAATACCGTGATCGTCATGACCTCCAATCTC GGTTCGATGCAGATCCAGGAACTGGTCGGTGATCGTGAAGCACAACGGGCAGCGGTGATGGATGCGATTTCCACCCACTT CCGTCCGGAGTTCATCAACCGCGTTGACGAAGTGGTGATCTTCGAGCCATTGGCGCGGGATCAGATCGCGGGCATCACCG AGATCCAGCTGGGCCGTCTGCGCAACCGTCTGGCCGAGCGCGAGCTGAAGCTGGAACTGAGCCCTGAGGCGATGGACAAG CTGATTGCCGTCGGTTACGACCCGGTCTATGGCGCACGGCCGCTGAAGCGGGCGATCCAGCGCTGGATCGAGAACCCGTT GGCGCAGTTGATCCTGTCGGGACGCTTCATGCCGGGCGAGACCGCAACCGGTGTGGTGGAGAACGACGAGATCACGTTCA ACTGA Protein sequence : MRIDRLTSKLQLALSDAQSLAVGHDHPAIEPAHLMQAMLEQQGGSIKPLLMQVGFDVNSLRKELTKELDQLPKIQNPTGD VNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENSKLGKLLLGQGVSKKALENAINNLRGGEAVNDANHEESRQA LDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSL DMGALIAGAKYRGEFEERLKALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYR QYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASR IRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKKRLEKLQEEIDRHEREYSDLEEIWNSEKAEVQGSAQIQQKIE QSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQHGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLM KMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEK HSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL GSMQIQELVGDREAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRNRLAERELKLELSPEAMDK LIAVGYDPVYGARPLKRAIQRWIENPLAQLILSGRFMPGETATGVVENDEITFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-155 | 45 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-103 | 42 |
