Gene Information

Name : Pfl01_5584 (Pfl01_5584)
Accession : YP_351312.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : ClpB protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 6255602 - 6258259 bp
Length : 2658 bp
Strand : -
Note : -

DNA sequence :
ATGATCAACGTAGACCTGCAACAACTCATCCAGGCGCTGGACGCCGAAACCCGTCGCGATCTGGAGCGTTCGGCCGAGCG
CTGCGTGGCCCGTGGCGGCAGCAAGATTCTGGTCGAAGACTTGCTGCTCGGCCTGCTGGAGCGCCCGAACGGTTTGCTCT
CGCGGGCACTGCAGGATGCCGACGTTGATGCCGGCGAACTGAGCGCCGCCCTGCAATCGCGGGTCGAGCACAGCGCTTCG
CGCAACCCGGTGTTCGCTCCGGAACTGGTGCAGTGGCTGCAAGACGCGCTGCTGGTGGCCAACCTTGAACTGGGCCAGAC
CTCGGTCGAAGACGCGGCGCTTATCCTCGCGCTGCTGCGCAACCCGATGCGCTACGCCGGCAGCCGCTACCAGCCGTTGC
TGGCCAAACTGAACATCGATCGCCTGAAGGAATTTGCGCTGTCGCAACAGCCTCAGGCAGCGGCCAACGGTAAGCCGGCC
GCCCAGGGCGAATCGCTGCTGGAGCGCTTCACCCATAACCTGACCCAACAGGCCCGCGACGGCAAACTCGACCCGGTGCT
GTGCCGCGATGGCGCGATCCGCCAGATGGTCGACATCCTCGCCCGTCGCCGCAAGAACAATCCGATCGTGGTCGGTGAAG
CCGGTGTCGGTAAAACCGCCATCGTCGAAGGCCTGGCCTCGCGCATCGCTGCCGGTGAAGTGCCGCAGGTGCTCAAGGGC
GTCGAGCTGCTGTCGCTGGACATGGGCCTGTTGCAGGCCGGCGCCAGCGTCAAAGGTGAATTCGAACGTCGTCTGAAAGG
CGTGATCGACGAGGTCAAAGCCTCGCCGAAGCCGATCATCCTGTTCATCGACGAGGCCCACACCCTGATCGGCGCGGGCG
GTAATGCCGGCGGTTCCGATGCGGCCAACCTGCTGAAGCCGGCACTGGCGCGCGGCGAACTGCGCACCATCGCCGCGACC
ACCTGGGCCGAGTACAAGAAATACTTCGAAAAAGACCCGGCGCTGGCCCGTCGTTTCCAGCCGGTTCAACTGCACGAACC
GACCGTGAGCGAAGCCGTCACCATCCTGCGTGGCCTGGCTCAGGTCTACGAAAAGAGCCACGGCATCTACCTGCGTGACG
ACGCGGTGGTTTCCGCAGCCGAGCTGTCTGCTCGTTACCTGGCCGGTCGGCAACTGCCGGACAAGGCCGTCGATGTGCTC
GACACCGCGTGCGCCCGCGTTCGCATCAGCCTCGCTGCTGCCCCGGAAAGCCTGGAACGCCTGCGTGGCGAACTGGCTGA
AGGCGGTCGTCAGCGTCAGGCCCTGCGCCGCGATGCCGAAGCCGGTCTGCTGATCGACCACGAAGCGCTGGAGGCACTGG
AAGCGCGCCTGGACGAAGCCGAAGCCGAAATGGTCGCACTGGAAACCCAGTGGACCGAGCAGAAACAACTGGCCGAGCGC
CTGCTGGAACTGCGCCAGCAACTGGCCAAGGCCCGTGAAGCCGCTGCGGTCGAGCCGGTGGTGACCGTTGAAGAAGACGC
CGAAGGCACCGTGATCGAAACCCACGCCGCCGAAGTTGACGAAGCTCTTAGCGTCGAAGCGCTGGAAGCACAACTCAACG
AAACCCACAGCGCCCTGACCGCCGCTCAGGTCAAGGAGCGTCTGGTCAGCTTCGAAGTCTGCCCGCGTCTGGTGGCCGAA
GTGATCAGCGCCTGGACCGGCGTGCCGCTGGCGCAACTGGCCCGCGAGCACAACGCCAAGGTCGCCAGCTTCGCCACCGA
CCTGCGCACCCGCATCCGGGGTCAGGAACAAGCCGTGCACGCCCTGGATCGCTCGATGCGCGCCACCGCAGCCGGCCTGA
ACAAGCCTGACGCACCGGTCGGCGTGTTCCTGCTGGTCGGCCCGAGCGGCGTCGGCAAGACCGAAACCGCACTGGCACTT
GCCGACCTGCTGTACGGCGGCGACCGTTTCATCACCACCATCAACATGTCCGAGTTCCAGGAGAAGCACACCGTTTCCCG
CCTGATCGGTGCACCGCCAGGTTACGTCGGTTACGGCGAGGGCGGCATGCTCACCGAGGCCGTGCGCCAGAAGCCGTACT
CGGTGGTGCTGCTCGATGAAGTCGAGAAGGCCGACCCGGACGTGCTCAACCTGTTCTACCAAATCTTCGACAAAGGCGTG
GCCAACGACGGCGAAGGGCGCGAGATCGACTTCCGCAATACGTTGATTCTGATGACCTCGAACCTGGGCAGCGACAAGAT
CAGCGACCTCTGCGAAGACGGCGCGCGTCCGACTGCCGAAGTGCTGGAAGAAACCATTCGCCCGGTGCTCAGCAAACACT
TCAAACCGGCGCTGCTGGCGCGGATGAAAGTGGTGCCGTACTACCCGGTCGGCGGCCCGGTGCTGCGCGAGCTGATCGAG
ATCAAGCTCGGTCGCTTGGGCGAGCGTCTGAACCGTCGCCAGCTGGATTTCACCTGGTGCCAGAACCTCGTCGATCACCT
GTCCGAGCGCTGCACCCAAAGCGAAAGCGGTGCACGCCTGATCGACCACTTGCTCGACCAGCACGTGCTGCCGCTGGTGG
CCGACCGCTTGCTCGACGCCATGGCCACCGGTGAAAGCCTCAAGCGCGTGCATGCGACGCTCGACGGTGAAGCCAGCGTG
ACCTGCGAGTTCGCCTGA

Protein sequence :
MINVDLQQLIQALDAETRRDLERSAERCVARGGSKILVEDLLLGLLERPNGLLSRALQDADVDAGELSAALQSRVEHSAS
RNPVFAPELVQWLQDALLVANLELGQTSVEDAALILALLRNPMRYAGSRYQPLLAKLNIDRLKEFALSQQPQAAANGKPA
AQGESLLERFTHNLTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKG
VELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAAT
TWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLAQVYEKSHGIYLRDDAVVSAAELSARYLAGRQLPDKAVDVL
DTACARVRISLAAAPESLERLRGELAEGGRQRQALRRDAEAGLLIDHEALEALEARLDEAEAEMVALETQWTEQKQLAER
LLELRQQLAKAREAAAVEPVVTVEEDAEGTVIETHAAEVDEALSVEALEAQLNETHSALTAAQVKERLVSFEVCPRLVAE
VISAWTGVPLAQLAREHNAKVASFATDLRTRIRGQEQAVHALDRSMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALAL
ADLLYGGDRFITTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGV
ANDGEGREIDFRNTLILMTSNLGSDKISDLCEDGARPTAEVLEETIRPVLSKHFKPALLARMKVVPYYPVGGPVLRELIE
IKLGRLGERLNRRQLDFTWCQNLVDHLSERCTQSESGARLIDHLLDQHVLPLVADRLLDAMATGESLKRVHATLDGEASV
TCEFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 4e-149 47
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 3e-149 47