|
Name : ccmF (RSP_2633) Accession : REF_jgi:RSP_2633 Strain : Genome accession: NC_007493 Putative virulence/resistance : Unknown Product : Cytochrome c maturation protein, CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1273007 - 1274977 bp Length : 1971 bp Strand : + Note : IMG reference gene:2512954576; PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF DNA sequence : ATGATTGTCGAACTCGGCCATTTCGCGCTGGTGCTGTCGCTGGCTGTGGCCCTTGTGCAGTCCGTGGTGCCGCTCGTCGG CGCGGATCGGCGCTGGTCTGGCTGGATGGCGGTGGCCGAACCCGCGGCGGTCACCCAGCTTCTGCTGATCGGCTTCTCCT TCGCCGCGCTGACCTGGGCCTTCGTGACCTCGGATTTCTCGGTGCGCCTCGTGGTGCTGAACTCGCACACGCTGAAGCCC ATGCTCTACAAGATCAGCGGCGTCTGGGGGAACCACGAGGGCTCGCTGCTCCTGTGGGTGCTGATCCTCGCGCTGTTCGG AGCCTGCGCCGCGGTCTTCGGGCAGAACCTGCCGCCCACGCTCAAGGCGCGCGTGCTGGCGGTGCAGGGGATGATCGGCG CGGCCTTCCTGGCCTTTCTCCTCTTCACCTCGAACCCGTTCCTGCGCATGGGCGAGGTGCCCTTCGACGGCGAGGATCTG AACCCGCTCCTGCAGGATCCGGGCCTCGCCTTCCACCCGCCCTTCCTTTACCTCGGCTATGTCGGCCTCTCGATGGCCTT CTCCTTCGCGGTGGCGGCCCTGATCGAGGGCCGCGTCGATGCCGCCTGGGGCCGCTGGGTCCGGCCCTGGACGCTCGCCG CCTGGGTGTTTCTCACCATCGGCATCGCGCTCGGCTCCTGGTGGGCCTATTACGAGCTCGGCTGGGGCGGCTTCTGGTTC TGGGACCCGGTCGAGAACGCCTCCTTCATGCCCTGGCTGATCGCGGCGGCGCTGCTCCACTCTGCCATCGTGGTCGAGAA GCGCGAAGCGCTGAAGAGCTGGACGATCCTGCTGGCCATCCTCGCCTTCGGCTTCTCGCTCATTGGCACCTTCATCGTGC GCTCGGGCGTCATCACCTCCGTCCATGCCTTCGCCAACGATCCCGAGCGCGGGATCTTCATCCTGATGATCCTCGCGGTC TTCATGGGCGGGGCGCTCACGCTCTTCGCCGCGCGGGCGAGCGCCATGGAGGCCAAGGGGGTCTTCGGCATCGTCAGCCG CGAGTCGGGCCTCGTGCTGAACAACGTGCTGCTGACGGTGGCCTGTTTCGTGGTCTTCATCGGCACGATCTGGCCGCTCC TGGCCGAACTCCTCTGGGGCCGCAAGCTGTCGGTGGGTGCTCCGTTCTTCAACGCGGCCTTCACCCCCTTCATGGTGGTG ATCGCCCTCGTCCTGCCTCTGGGCGCCGTCCTGCCCTGGAAGCGGGCCGAGCTCGGCCGCGGGATGCGGCCGCTCTGGGG GGCGCTCGCGCTCTCGGCGGCCCTGGGTGCGCTGGTCTTCGCGCTGCAGACGGGCCGGTCGGCGCTCGGGCCCGTCGGCC TCGCGCTCGGCGCCTGGCTCGTCTTCGGCACGCTCCTCGACCTCTGGGGCCGCACCGGGCGCGGCGCGCTCGGCGGGCGG CTCGCGCGCCTCCGGCGACTGCCGCGCGCGGACTGGGGCAAGGCCACTGCCCATGCGGGCCTCGGCGTCACGATCTTCGC CGTGGCGGCCATCACCGCCTGGCAGGTCGAGTCGATCCGCGTGATGAAGCCGGGCGAGACCTTCGCCCTCGGCCGCTACG ACGTCCTGCTCGAGGGCGTGCGCGAGATCGAGGGGCCGAACTACCGCTCGACCGTGGCCGACTTCCGCGTGACCCGCGAC GGGGCCGAAGTGGCGACACTCCATCCCGAGAAGCGCGTCTATCCGGTGGCCGCCATGCCCACGACGGAAGCCGCCATCGA CTACGGCTTCACCCGCGACCTCTACCTCGTGATCGGCGACCCGCAGGAGGGCGGCGGCTATGCGGTGCGCAGCTACATCA AGCCCTTCGCCAACTGGATCTGGGGCGGCGCGCTGCTGATGGCGCTCGGCGGGCTGCTGAGCCTCTCGGACCGCCGCTAC CGCATCGCCGCCGGGGCGCGCCGGATGCCGGCCGCGGTGGCTGCAGAATGA Protein sequence : MIVELGHFALVLSLAVALVQSVVPLVGADRRWSGWMAVAEPAAVTQLLLIGFSFAALTWAFVTSDFSVRLVVLNSHTLKP MLYKISGVWGNHEGSLLLWVLILALFGACAAVFGQNLPPTLKARVLAVQGMIGAAFLAFLLFTSNPFLRMGEVPFDGEDL NPLLQDPGLAFHPPFLYLGYVGLSMAFSFAVAALIEGRVDAAWGRWVRPWTLAAWVFLTIGIALGSWWAYYELGWGGFWF WDPVENASFMPWLIAAALLHSAIVVEKREALKSWTILLAILAFGFSLIGTFIVRSGVITSVHAFANDPERGIFILMILAV FMGGALTLFAARASAMEAKGVFGIVSRESGLVLNNVLLTVACFVVFIGTIWPLLAELLWGRKLSVGAPFFNAAFTPFMVV IALVLPLGAVLPWKRAELGRGMRPLWGALALSAALGALVFALQTGRSALGPVGLALGAWLVFGTLLDLWGRTGRGALGGR LARLRRLPRADWGKATAHAGLGVTIFAVAAITAWQVESIRVMKPGETFALGRYDVLLEGVREIEGPNYRSTVADFRVTRD GAEVATLHPEKRVYPVAAMPTTEAAIDYGFTRDLYLVIGDPQEGGGYAVRSYIKPFANWIWGGALLMALGGLLSLSDRRY RIAAGARRMPAAVAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-106 | 50 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 7e-115 | 49 |
